Query= MSMg01no147_a22.b1 MSMg01no147_a22.b1 CHROMAT_FILE:
MSMg01no147_a22.b1 PHD_FILE: MSMg01no147_a22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:09:32 2005
(611 letters)
>mm_chr11_105050612_105051622
Length = 1011
Score = 636 bits (329), Expect = 0.0
Identities = 335/337 (99%)
Strand = Plus / Minus
Query: 1 aatcaaggaaaatgcacatttaaattgctacagaggagcagaggaaggaataaactgtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 aatcaaggaaaatgcacatttaaattgctacagaggagcagaggaaggaataaactgtaa 280
Query: 61 caagtcttgattgaaaacaagacagtaagttttatattatgaaaagtaaattatctagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 caagtcttgattgaaaacaagacagtaagttttatattatgaaaagtaaattatctagtc 220
Query: 121 cttaaagaaagagatcctgaactagacatagtgttgatgcctttaatcccagtactcaag 180
||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 219 cttaaggaaagagatcctgaactaaacatagtgttgatgcctttaatcccagtactcaag 160
Query: 181 aggcagtggcagggctggagagatggctcagcagttaagagcactgactgctcttccaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 aggcagtggcagggctggagagatggctcagcagttaagagcactgactgctcttccaga 100
Query: 241 ggtcctgagttcaatttccagcaaccacatggtgactcacaaccatctgtaatgggaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 ggtcctgagttcaatttccagcaaccacatggtgactcacaaccatctgtaatgggaatc 40
Query: 301 tgatgccctcttctgctgtgtctggagacagcgacag 337
|||||||||||||||||||||||||||||||||||||
Sbjct: 39 tgatgccctcttctgctgtgtctggagacagcgacag 3
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1011
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1001
Effective search space: 601601
Effective search space used: 601601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no147_a22.g1 MSMg01no147_a22.g1 CHROMAT_FILE:
MSMg01no147_a22.g1 PHD_FILE: MSMg01no147_a22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:09:32 2005
(656 letters)
>mm_chr11_104905122_104906178
Length = 1057
Score = 1224 bits (633), Expect = 0.0
Identities = 651/657 (99%), Gaps = 1/657 (0%)
Strand = Plus / Plus
Query: 1 aaatgggaataagatgccctcctggctactggacagcaaggccactacagacaacagcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatgggaataagatgccctcctggctactggacagcaaggccactacagacaacagcat 260
Query: 61 catttcagaaagacaggaaaaaaagaatttggagggatttagccatgaagaaataacaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catttcagaaagacaggaaaaaaagaatttggagggatttagccatgaagaaataacaaa 320
Query: 121 tgtttggaaaaataaatgtgttcgacctgactgaacggttgacatgtaagtgtggtttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtttggaaaaataaatgtgttcgacctgactgaacggttgacatgtaagtgtggtttgg 380
Query: 181 aagagcacattctcttgttcattgggacttttgtttgttcccacgtatcagttaaatttt 240
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagagcacattctcttgtccattgggacttttgtttgttcccacgtatcagttaaatttt 440
Query: 241 tactttgtgtcagaagaatggtttatccagtaaaggtgcttgctgtgcagactgggggtg 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tactttgggtcagaagaatggtttatccagtaaaggtgcttgctgtgcagactgggggtg 500
Query: 301 tgagtccgattcctggaacccagtgggaaagggaaactgacccccgacaatcgtcatctg 360
||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 501 tgagtccgattcctggaacccagtgggaaggggaaactgacccctgagaatcgtcatctg 560
Query: 361 acctccgcctacacacggcaccacagggacattctacacacacacacactaattgactta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acctccgcctacacacggcaccacagggacattctacacacacacacactaattgactta 620
Query: 421 aaataaaaatatctaactttttaaaaaaa-gatttcctggaggattgtgatgcattaagt 479
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 621 aaataaaaatatctaactttttaaaaaaaagatttcctggaggattgtgatgcattaagt 680
Query: 480 ccacaaactttatttttctccattaatttcgagtttcaaatcttattataaaggttcatt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccacaaactttatttttctccattaatttcgagtttcaaatcttattataaaggttcatt 740
Query: 540 gacaaatcccaatttgagtctgtaatagaaatgcccaaactcctttcttccttctcttaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gacaaatcccaatttgagtctgtaatagaaatgcccaaactcctttcttccttctcttaa 800
Query: 600 aattccttctgaaagctaggttcaagggattggtcagggagactgagtttgtttagc 656
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aattccttctgaaagctaggttcaagggattggtcagggagactgagtttgtttagc 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1057
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1047
Effective search space: 676362
Effective search space used: 676362
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
