Query= MSMg01no147_g14.b1 MSMg01no147_g14.b1 CHROMAT_FILE:
MSMg01no147_g14.b1 PHD_FILE: MSMg01no147_g14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:00 2005
(660 letters)
>mm_chr11_106784036_106785095
Length = 1060
Score = 1220 bits (631), Expect = 0.0
Identities = 649/659 (98%), Gaps = 8/659 (1%)
Strand = Plus / Minus
Query: 6 gaattcactatattatcaatgatgtcctgtgctatattggctttttgcaagctgagggtt 65
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1006 gaattcactatataatcaatgatgtcctgtgctatattggctttttgcaagctgagggtt 947
Query: 66 gaacccaggtctttgtatatttgagaatttgagacaaccactctagccactgagccttat 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 946 gaacccaggtctttgtatatttgagaatttgagacaaccactctagccactgagccttat 887
Query: 126 ctccagacttcttcttctccttattctaatagttttctgccactagactgatctttaaat 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 ctccagacttcttcttctccttattctaatagttttctgccactagactgatctttaaat 827
Query: 186 attattattttttaaaaatctcagtccaagcctattactgcatccactacatagaaggag 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 attattattttttaaaaatctcagtccaagcctattactgcatccactacatagaaggag 767
Query: 246 ttaagaaaccattagctggatgaatgaattctcataggaatattttgctgtggagagaat 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 ttaagaaaccattagctggatgaatgaattctcataggaatattttgctgtggagagaat 707
Query: 306 ggccatttctttctgttcaatgctgttttctttttctgaaagtttttacatctaaacaca 365
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 706 ggccatttctttctgttcaatgctgttttcttttcctgaaagtttttacatctaaacaca 647
Query: 366 ta----tccccaatatccctacttttcatctttttccttaccaatttctaggtatcagat 421
|| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 tataatt----aatatccctacttttcatctttttccttaccaatttctaggtatcagat 591
Query: 422 gatagtccactgcatagtttctatataatgtgtactaacgaaatagccaagggggaatgt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 gatagtccactgcatagtttctatataatgtgtactaacgaaatagccaagggggaatgt 531
Query: 482 gcataaaaactcctttttacttgaaggtttctggctcagagagctctgttttgggcctac 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 gcataaaaactcctttttacttgaaggtttctggctcagagagctctgttttgggcctac 471
Query: 542 actggtgaggcttttttgtcaagagatttattggaagtggctttcctattaacattagtc 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 actggtgaggcttttttgtcaagagatttattggaagtggctttcctattaacattagtc 411
Query: 602 cttttgattttattatttttttgtcttctaaaatctttattttatttattaattaaagt 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 cttttgattttattatttttttgtcttctaaaatctttattttatttattaattaaagt 352
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1060
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1050
Effective search space: 682500
Effective search space used: 682500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no147_g14.g1 MSMg01no147_g14.g1 CHROMAT_FILE:
MSMg01no147_g14.g1 PHD_FILE: MSMg01no147_g14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:00 2005
(590 letters)
>mm_chr11_106660855_106661846
Length = 992
Score = 1067 bits (552), Expect = 0.0
Identities = 583/596 (97%), Gaps = 7/596 (1%)
Strand = Plus / Plus
Query: 1 cattccaagaacccacagagaaggagagaaagaactccccaaagttgtcctctgacctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cattccaagaacccacagagaaggagagaaagaactccccaaagttgtcctctgacctcc 260
Query: 61 acacttgggttgtgacactcaagctcctgcacaagtatgcccctcccccc-aaagtgtgc 119
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 261 acacttgggttgtgacactcaagctcctgcacaagtatgcctctcccccccaaagtgtgc 320
Query: 120 aaacagggggaaatggtgaaactgtgctgtgatcacctgcctgccctgctgtgagagccc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaacagggggaaatggtgaaactgtgctgtgatcacctgcctgccctgctgtgagagccc 380
Query: 180 cc-ttgtctcttcttctccaagggactcatggcaggtggtggttggcttgctcatgtcat 238
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccttgtctcttcttctccaagggactcatggcaggtggtggttggcttgctcatgtcat 440
Query: 239 tatcatgttggctcaggacagacagggtcttaacttagcctttatgtttgtctttttaaa 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatcatgttggctcaggacagacagggtcttaacttagcctttatgtttgtctttttaaa 500
Query: 299 caggtgaaactgagcagtattctaaagattctcatggacaacaacctggggaggacctag 358
|||||||||||||||||||||||||||||||||||||| || || |||||||||||||||
Sbjct: 501 caggtgaaactgagcagtattctaaagattctcatggagaagaagctggggaggacctag 560
Query: 359 aacgtaccgaggaggcgaagtggagaaacgcttcttttatgaggtagtgtgcagtgcctg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aacgtaccgaggaggcgaagtggagaaacgcttcttttatgaggtagtgtgcagtgcctg 620
Query: 419 tgaatttcatcatacaagttatgcttcccactctgcgagattaagtccagcatactctaa 478
|||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 621 tgaatttcatcagacaagttatgcttcccactctgtgagattaagtccagcatactctaa 680
Query: 479 tgtccctccaaaagctgatgtgaacattttatgcctttctgagctcttgactttcctttc 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgtccctccaaaagctgatgtgaacattttatgcctttctgagctcttgactttcctttc 740
Query: 539 ctatctctgctttcacaacttttttctttttcttttttttt-----ctttttttgg 589
||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 741 ctatctctgctttcacaacttttttctttttcttttttttttttttctttttttgg 796
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 992
Length adjustment: 10
Effective length of query: 580
Effective length of database: 982
Effective search space: 569560
Effective search space used: 569560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
