Query= MSMg01no147_h08.b1 MSMg01no147_h08.b1 CHROMAT_FILE:
MSMg01no147_h08.b1 PHD_FILE: MSMg01no147_h08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:03 2005
(351 letters)
>mm_chr11_42070665_42071413
Length = 749
Score = 636 bits (329), Expect = 0.0
Identities = 342/347 (98%), Gaps = 2/347 (0%)
Strand = Plus / Minus
Query: 5 gaattcatgggacagccatgtacggtttgagttaattttatgatataacccacacttgaa 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gaattcatgggacagcaatgtacggtttgagttaattttatgatataacccacacttgaa 490
Query: 65 cactggtatatgtggagaaggttactttgctattagcattataatatgttatattttttt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 cactggtatatgtggagaaggttactttgctattagcattataatatgttatattttttt 430
Query: 125 gtttcagaacttactaaaagcagaaactagaagaatacaaagcagcataaaccatacatg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gtttcagaacttactaaaagcagaaactagaagaatacaaagcagcataaaccatacatg 370
Query: 185 ctttttctttattttattttttgtctgtaaagcaacatgtgacgtgctaagcctattctg 244
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 369 ctttttctttattttattttttgtctgtaaagcaacatgtgaggtactaagcctattctg 310
Query: 245 caggtattaacctgaaacaagaacatatgtaagaaccattgatctcttcctgtttagaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 caggtattaacctgaaacaagaacatatgtaagaaccattgatctcttcctgtttagaga 250
Query: 305 aactgataaagtgctagtctttttttttttttcatttttttgttagg 351
||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 249 aactgataaagtgctagtc--tttttttttttcatttttttgttagg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 351
Length of database: 749
Length adjustment: 9
Effective length of query: 342
Effective length of database: 740
Effective search space: 253080
Effective search space used: 253080
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no147_h08.g1 MSMg01no147_h08.g1 CHROMAT_FILE:
MSMg01no147_h08.g1 PHD_FILE: MSMg01no147_h08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:03 2005
(343 letters)
>mm_chr11_41961922_41962667
Length = 746
Score = 611 bits (316), Expect = e-179
Identities = 336/344 (97%), Gaps = 3/344 (0%)
Strand = Plus / Plus
Query: 1 ttaatactcaactgttcaatgtaaccctgaaacccaggcttaagaaaagtgtacaaatat 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 ttaatactcaactgttcaatgtaaccctgaaacccaggcttaagaacagtgtacaaatat 260
Query: 61 gtatttggccaagataaaatattataagatttttaaattatggttgccttttacatgtag 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 gtatttggccaagataaaatattataagatttttaaattatggttgccttttacgtgtag 320
Query: 121 atgaggctccttacataaacaaatactgcctgtgaatcaaaacttggaaggtcactttac 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgaggccccttacataaacaaatactgcctgtgaatcaaaacttggaaggtcactttac 380
Query: 181 tctgaactgagtgaagcagaaaacccgagatcttgctccccata---tgtcggcaccctg 237
|||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 381 tctgaactgagtgaagcagaaaacccgagatcttgctccccataatatgtctgcaccctg 440
Query: 238 tctgccccatcactctttgaaagtccattcatacagctatctcttgaagaaacttgtatg 297
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctgccccatcaccctttgaaagtccattcatacagctatctcttgaagaaacttgtatg 500
Query: 298 ggcaattgtgagaaagtaatttaatgtattctgagacaaattta 341
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggcaattgtgagaaagtaatttaatgtattctgagacaaattta 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 746
Length adjustment: 9
Effective length of query: 334
Effective length of database: 737
Effective search space: 246158
Effective search space used: 246158
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
