Query= MSMg01no147_j17.b1 MSMg01no147_j17.b1 CHROMAT_FILE:
MSMg01no147_j17.b1 PHD_FILE: MSMg01no147_j17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:14 2005
(368 letters)
>mm_chr11_58927300_58928062
Length = 763
Score = 615 bits (318), Expect = e-180
Identities = 337/346 (97%), Gaps = 5/346 (1%)
Strand = Plus / Minus
Query: 23 caaaacccgtgaccaccacagaacacatctgaatacactgaaattgaaaactgtggctta 82
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 760 caaaacccgtgaccaccacagaacacatctgaatacactgaaattgaaaactgtggttta 701
Query: 83 gtctggtgtgatggttcagcaggtagaggtgcttgctgaataagtctcatgaccgacctg 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 gtctggtgtgatggttcagcaggtagaggtgcttgctgaataagtctcatgaccgacctg 641
Query: 143 agttcagtccctggaacccacgtgtgtaaggaagaagaggaccaactccacaaagtggtc 202
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 640 agttcagtccctggaacccacgtgtgtaaggaagaagagaaccaactccacaaagtggtc 581
Query: 203 ctctggcctccacctgcaagtgtggaatacctcctcccccatatcacacgcaacaataat 262
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 580 ctctggcctccacctgcaagtgtggaatgcctcctcccccatatcacacgcaacaataat 521
Query: 263 gctaagtaaaaataatttataaacccagggatttcagcagagccttgcataaatgacaga 322
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gctaagtaaaaa-----tataaacccagggatttcagcagagccttgcataaatgacaga 466
Query: 323 agacaaacaacgaaacatggtaagtatctggtggtgtgtgtggttg 368
|||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 465 agacaaacaacgaaacatgggaagtatctggtggtgtgtgtggttg 420
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 763
Length adjustment: 9
Effective length of query: 359
Effective length of database: 754
Effective search space: 270686
Effective search space used: 270686
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no147_j17.g1 MSMg01no147_j17.g1 CHROMAT_FILE:
MSMg01no147_j17.g1 PHD_FILE: MSMg01no147_j17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:14 2005
(615 letters)
>mm_chr11_58755447_58756461
Length = 1015
Score = 1127 bits (583), Expect = 0.0
Identities = 607/615 (98%)
Strand = Plus / Plus
Query: 1 attatagggctctgaaataaatgagtgattgactatcaagtggatagacatagagccctg 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 attatagggctctgaaataaatgagtgattgactatcaagtggatagacgtagagccctg 260
Query: 61 acattgatgatgaacaggacagtgaagtggagggatcaggcccagcctggatgacagaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 acattgatgatgaacaggacagtgaagtggagggatcaggcccagcctggatgacaggca 320
Query: 121 ggggattgaagtgcctggacaataaggaagaggttgaatgacagggacctatctatccat 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 ggggattgaagtgcctggacaataaggaaaaggttgaatgacagggacctatctatccat 380
Query: 181 ttaccttacaatcagaataaaagtaattggtctgatacaattttctgtatttgtgatggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaccttacaatcagaataaaagtaattggtctgatacaattttctgtatttgtgatggt 440
Query: 241 aaaaccccaaaaaacaatcaaaagggagattttgtgaagaacagtatttagaaagggcat 300
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaaccccaaaaaacaaccaaaagggagattttgtgaagaacagtatttagaaagggcat 500
Query: 301 cacatcaggaggggaacacaagccactgtaacaggggggctgacccaagtacatctgaga 360
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 cacatcaggaggggaacacaagccactgtaacaggggggctgaggcaagtacatctgaga 560
Query: 361 agcagggaaggagcatcacacgagatgctccaaaacaagcctctgtggccacgagagagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agcagggaaggagcatcacacgagatgctccaaaacaagcctctgtggccacgagagagc 620
Query: 421 tgtgggcaacctccctgcagtatcctgtgtatatcgtggcagtaccctctgagcctctga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 621 tgtgggcaacctccctgcagtatcctgtgtatatcgtggcagtaccctctgagtctctga 680
Query: 481 gattgtcttcattgggcacgcctgctttacaattacatatttttggttagtgctggccaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gattgtcttcattgggcacgcctgctttacaattacatatttttggttagtgctggccaa 740
Query: 541 aacatcgtatgacttcctgggaagaggtcaggacatgcctatttgcccagatagggcact 600
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 741 aacatcgtatgacttcctgggaagaggtgaggacatgcctatttgcccagatagggcact 800
Query: 601 gctatgtcaaagaaa 615
|||||||||||||||
Sbjct: 801 gctatgtcaaagaaa 815
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1015
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1005
Effective search space: 608025
Effective search space used: 608025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
