Query= MSMg01no148_f20.b1 MSMg01no148_f20.b1 CHROMAT_FILE:
MSMg01no148_f20.b1 PHD_FILE: MSMg01no148_f20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:14 2005
(368 letters)
>mm_chr11_18799267_18800035
Length = 769
Score = 673 bits (348), Expect = 0.0
Identities = 360/366 (98%), Gaps = 5/366 (1%)
Strand = Plus / Minus
Query: 6 gaattcctcccat---atttcatatccttaatactgttgagcatgggcactttaaaaagg 62
||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 569 gaattcctcccataaaatt--atatccttaatactgttgagcatgggcactttaaaaagg 512
Query: 63 gctagctacgcattgtttccctgtggtagatgaaagcttagactcctcccatcagggaag 122
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 gctagctaggcattgtttccctgtggtagatgaaagcttagactcctcccatcagggaag 452
Query: 123 tccaaacaccacttcttgaaactgctgcttctcttcctaggcagcatcagaatttttagg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tccaaacaccacttcttgaaactgctgcttctcttcctaggcagcatcagaatttttagg 392
Query: 183 ctaagactatgtaaccctacctgaagctcagacttccagctgaggtagcattttgacacc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ctaagactatgtaaccctacctgaagctcagacttccagctgaggtagcattttgacacc 332
Query: 243 tatagggtgatcaagttagactcggagttgggggacccattctctgcgaagctggtatat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tatagggtgatcaagttagactcggagttgggggacccattctctgcgaagctggtatat 272
Query: 303 ctggatgtgtacagttgctttaacctagggaaggtatggcttggggtcgactttgaacac 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ctggatgtgtacagttgctttaacctagggaaggtatggcttggggtcgactttgaacac 212
Query: 363 catgca 368
||||||
Sbjct: 211 catgca 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 769
Length adjustment: 9
Effective length of query: 359
Effective length of database: 760
Effective search space: 272840
Effective search space used: 272840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_f20.g1 MSMg01no148_f20.g1 CHROMAT_FILE:
MSMg01no148_f20.g1 PHD_FILE: MSMg01no148_f20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:14 2005
(144 letters)
>mm_chr11_18698622_18699165
Length = 544
Score = 279 bits (144), Expect = 7e-80
Identities = 144/144 (100%)
Strand = Plus / Plus
Query: 1 tccacatatgctaaattgatctgcaagggttgtaaccaaattcaaccaagaaccttgaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccacatatgctaaattgatctgcaagggttgtaaccaaattcaaccaagaaccttgaat 260
Query: 61 gtatactttgcccatcggcctgttagtgacatgatgtactttgaagctgtgttttggtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtatactttgcccatcggcctgttagtgacatgatgtactttgaagctgtgttttggtta 320
Query: 121 tttggttgtttggttgtttggttg 144
||||||||||||||||||||||||
Sbjct: 321 tttggttgtttggttgtttggttg 344
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 144
Length of database: 544
Length adjustment: 8
Effective length of query: 136
Effective length of database: 536
Effective search space: 72896
Effective search space used: 72896
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
