TCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAGAATCCGCGGAAT
TCTCACTATGTCAACATAACACAATTTAGAATGTGATTTGAAGAGATTAT
TACATATTCTTGTGATGAATTTAAGAAATGATCTATGAGAAGTTTTTATT
GTTTTGGGGTACACACCTGATTCTAAATTCAAGCCTAACACATAGACCCA
TTTCAAGGACATGCTATTTGTTCTTCTATTTTTATCTCTGTATCAGTGGT
TTTAAAATTTAACTAATTCATTGAGATAAATGAGTAACATTGAATACAGA
TCAGTATGGGATTATATTCCTTGAAGTCTGATAACAACATGTAGAAGAAT
CAACATGCATTTCAAAGAAATGATTCAGTAGAAGGTGTAATAAATCTATA
TGAAAATTTTACATAATTGCCAAAGAAATCATATTTCAGAAGGATATTTT
CAGAAAACAAAAATTCGTTGATGACCGTAGCTACAAAATACAGACTATCA
AATAAATAATTAAAATAACTCCAAATTTTAAACTATGTTTTACATACACA
CAGCAGCTAAAGGCTTGAAAATATATATACCAATATGTTAATTGCAATTA
TTGTTGGAAGATAATACAATAGGTTATCCTAATTTTCTTCATTATAGATT
TATTTTCAACTCTTTACAATAATTATGAATTGTTTTTATAACTATTAAAA
CAGCATATGC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXATGTCTCTTTTACTGTGAAGTTGGGG
GGAGGGGGAAGGTATGTCTGTTGTCCCCCCCCTCCTCTCTCCCATTTTTC
CCTCTCCCCTCTTTCTCTTTACCTTCCCCCTCTTCCTCTCTTTTCTTCTT
CTTCCCTTTGGTTCCTCCCCCCTCGTCTCTTCTGCTTTTGTTTTTTTTTT
TTTCCGCCCCGCCGCGCTTCGCTAACTCCGCTCGGCACCCCTCCTACGCG
AACCGCTGACACTTATTCCCCCTAACAACAAACTTTTTTTTCTTTTTTTC
GCGGCGTACTTGGGCGCATCCTGATTCGCCTATAACTCAGCTTCCCTATG
CCCTCGCCTCCATAGATAGATATTATATTTTATAAACGACCACACCCCTC
TGTTGTTACAGACTATGGCCCCAAGCCCTTCCCACAACCCTATATCCGTT
ATTGCCCAACCGACTCTAAAACTATCCGTTAAACCCCAGCGTTCATAAAA
TCCAGCCAAAAGTCCGCTACTTAGATACGCTCATGAACTCTATAATTTCC
CCCGTTCCGCCCTAGATAAGCGCCCGCGGCCGCAACATTCGTCTCCCTGT
CTCTTCTGCTTTTATATCCTTTATCCATATATACCGCACGCTATATTACC
GATACCCTATATGAATATGATTTCTATAACCTCTTATCGTCGCTATCAAC
AATCTCCCCCTCCGCCCGCTCTTTAATTCTCCGCTTCTTCTN

Query= MSMg01no148_n02.b1 MSMg01no148_n02.b1 CHROMAT_FILE:
MSMg01no148_n02.b1 PHD_FILE: MSMg01no148_n02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:50 2005
         (586 letters)



>mm_chr11_36738446_36739432
          Length = 987

 Score = 1042 bits (539), Expect = 0.0
 Identities = 575/587 (97%), Gaps = 1/587 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   attctcactatgtcaaca-taacacaatttagaatgtgatttgaagagattattacatat 59
           |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctcactatgtcaaaaataacacaatttagaatgtgatttgaagagattattacatat 260

                                                                       
Query: 60  tcttgtgatgaatttaagaaatgatctatgagaagtttttattgttttggggtacacacc 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcttgtgatgaatttaagaaatgatctatgagaagtttttattgttttggggtacacacc 320

                                                                       
Query: 120 tgattctaaattcaagcctaacacatagacccatttcaaggacatgctatttgttcttct 179
           ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 tgattctaaattcaagcctgacacatagacccatttcaagaacatgctatttgttcttct 380

                                                                       
Query: 180 atttttatctctgtatcagtggttttaaaatttaactaattcattgagataaatgagtaa 239
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 atttttatctctgtatcagtggttttaaaattaaactaattcattgagataaatgagtaa 440

                                                                       
Query: 240 cattgaatacagatcagtatgggattatattccttgaagtctgataacaacatgtagaag 299
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 cattgaatacagatcagtatgggattatactccttgaagtctgataacaacatgtagaag 500

                                                                       
Query: 300 aatcaacatgcatttcaaagaaatgattcagtagaaggtgtaataaatctatatgaaaat 359
           |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 501 aatcaacaagcatttcaaagaaatgattcagtagaaggtgtaataaatctatatgaaatt 560

                                                                       
Query: 360 tttacataattgccaaagaaatcatatttcagaaggatattttcagaaaacaaaaattcg 419
           ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttacataattgttaaagaaatcatatttcagaaggatattttcagaaaacaaaaattcg 620

                                                                       
Query: 420 ttgatgaccgtagctacaaaatacagactatcaaataaataattaaaataactccaaatt 479
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgatgaccatagctacaaaatacagactatcaaataaataattaaaataactccaaatt 680

                                                                       
Query: 480 ttaaactatgttttacatacacacagcagctaaaggcttgaaaatatatataccaatatg 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttaaactatgttttacatacacacagcagctaaaggcttgaaaatatatataccaatatg 740

                                                          
Query: 540 ttaattgcaattattgttggaagataatacaataggttatcctaatt 586
           ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 741 ttaattgcaattattgttggaagataatacaataggttatcttaatt 787


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 987
Length adjustment: 10
Effective length of query: 576
Effective length of database: 977
Effective search space:   562752
Effective search space used:   562752
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)