Query= MSMg01no149_n20.b1 MSMg01no149_n20.b1 CHROMAT_FILE:
MSMg01no149_n20.b1 PHD_FILE: MSMg01no149_n20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:16 2005
(627 letters)
>mm_chr11_81560941_81561967
Length = 1027
Score = 1151 bits (595), Expect = 0.0
Identities = 616/623 (98%), Gaps = 2/623 (0%)
Strand = Plus / Plus
Query: 6 ggaattctgtatatttcca-catattagctctgaagggagggaagaagccatatctctgg 64
||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 206 ggaattctgtatatttcaaacatatta-ctctgaagggagggaagaagccatatctctgg 264
Query: 65 cagagtggcattcattctggtggcccatttccatagacctttgactttgcaagaatattt 124
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 265 cagagtgacattcattctggtggcccatttgcatagacctttgactttgcaagaatattt 324
Query: 125 tagctccaacctttctccctggtgctataaacacagggagtggggagcgtcatttcttca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tagctccaacctttctccctggtgctataaacacagggagtggggagcgtcatttcttca 384
Query: 185 tttccagcagccatagaaattatttcccttatttctcaaaaccatggcaaattagcacct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttccagcagccatagaaattatttcccttatttctcaaaaccatggcaaattagcacct 444
Query: 245 ttgaccatccttttcaggcctgtcttcctcattcattgttgctgacacatgaacagttta 304
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 445 ttgaccatccttttcaggcctgtcttcctcactcattgttgctgacacatgaacagttta 504
Query: 305 tggtgttctgtgtaggcttccacttccttgcgtgctgctaaaaaaccttccagctggtgg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tggtgttctgtgtaggcttccacttccttgcgtgctgctaaaaaaccttccagctggtgg 564
Query: 365 tctctcttccaatctgtctctatgcttgtctcaattctgtagaagtaaatctaaggcagc 424
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 565 tctctcttccaatctgtctctacgcttgtctcaattctgtagaagtaaatctaaggcagc 624
Query: 425 gtttccctaaagggcttttaaagctcaccaggtttatgaaatgttactaggtgtctcacc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtttccctaaagggcttttaaagctcaccaggtttatgaaatgttactaggtgtctcacc 684
Query: 485 aataaagtattttgtagccaataagttggaaaaacactggctgctgtggatttcagagta 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aataaagtattttgtagccaataagttggaaaaacactggctgctgtggatttcagagta 744
Query: 545 catatttgcacacagaagcatcataaatcctgcaataaagaaacctattcaaatttcaag 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 catatttgcacacagaagcatcataaatcctgcaataaagaaacctattcaaatttcaag 804
Query: 605 tttagtttgtctagattttccca 627
|||||||||||||||||||||||
Sbjct: 805 tttagtttgtctagattttccca 827
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space: 627489
Effective search space used: 627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no149_n20.g1 MSMg01no149_n20.g1 CHROMAT_FILE:
MSMg01no149_n20.g1 PHD_FILE: MSMg01no149_n20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:16 2005
(576 letters)
>mm_chr11_81624653_81625628
Length = 976
Score = 439 bits (227), Expect = e-127
Identities = 230/231 (99%)
Strand = Plus / Minus
Query: 1 ctttccctttctgaacttgttctgcagccatttcctccatcctggagaaaggctcattat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ctttccctttctgaacttgttctgcagccatttcctccatcctggagaaaggctcattat 254
Query: 61 gactgaggaagtaaaggaaactcccaatttttaggaaccaaacaaaacccacaagtctca 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 253 gactgaggaagtaaaggaaactcacaatttttaggaaccaaacaaaacccacaagtctca 194
Query: 121 ggaagttcctgaaatttacaagattcataaaaccctgcctcaaagttacataagccacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ggaagttcctgaaatttacaagattcataaaaccctgcctcaaagttacataagccacaa 134
Query: 181 caatcactagggagaagccactctctgaccttctcagctgcctgaaaattc 231
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 caatcactagggagaagccactctctgaccttctcagctgcctgaaaattc 83
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 976
Length adjustment: 10
Effective length of query: 566
Effective length of database: 966
Effective search space: 546756
Effective search space used: 546756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
