XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTGCTA
CAGATACGTGAGAAGTGAAATCTCAGAGATCATCTAGCAGGCTGAGATGG
AGCCACACAGCTATGAGGCCTCTGACCACACCTTCAAGAAAAATACACAC
ACTGGCTCTTCTACAGCCCACACCTGCCAGAATTTCTCAGGTAGTGTGTC
TGCAGACCTTGTCTGCTCTCTGCTCTCTTTGTTCCCTCTGCAGACCCAAC
CCCTCACTCTCTTCCCTAGCACTGCAACAGAACTACACCTACACTCTGCC
TCCTTTCACTCTTGCCCATGACTCCTGTGCATCTCACAGACCACCCCCTC
CTGACCACTCTTCCCCACTGTCACTGTGTCTCCAACACCAACAGACATTC
CCTGTGAACACAGTAAGTGAGAAGGCTAGTAACACAGGTAACACAGCTAT
CCCACTCCCTGAAAATTCAGAGAGGAAACAGACACCAAGGAACAAAACAC
CCTCCCAAGAAAGAGCAACCCTGTAATCAGCACCTACACCAATAATTACA
CAAACACACATGCTTAGGTGGGACCAATTTAAGTACTGAATGGGATAAAG
GTGCTTTATGTTTTGATTGGCAATTACCACCAAGTACATGCTGTATTTCC
TAGAGAGGTTTTGAACCCCCAATAACGCAACCTGCTTAATAAACCAGCCA
TGATGCAGACCACATTATGCAACCAAN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCAAATGGCT
GAGAAGCACCTGAAAAAAATGTTCATCATCCTTAATCATCAGGGAAATGC
AAATCAAAACAACACTGAGATTCCATCTCACACCAGTCAGAATGGCTAAG
ATAAAAAACTCAGGTGACAGCAGATGCTGGCAAGGATGTGGAGAAAGAGG
AACACTCCTCCATTGCTGGTGGGATTGCAAGCTTGTACAATCACTCTGGA
AATCAGTCTGGTGGTTCCTCAGATAATTGGACATAGTACTACCGGAGGAT
CCAGCAACACCTCTCCTGGGCATATATCCAGAAGATGTTCCAACTGGTAA
GAAAGGCACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCA
GAAGCTGGAAAGAACTCAGATGCCCCTCAACAGAGGAATGGATACAGAAA
ATGTGGTACAATTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGA
ATTTATGAAATTCCTAGCCAAACGGATGGACCTGGAGGGCATCATCCTGA
GTGAGGTAACGCAATCACCAAAGAACTCCCATGATATGTCTTCACTGATA
AGTGGATATTAGCCCAGAAACGTAGAATACCCCAGATACAAGATACCACG
CCCATGAATCTCAAGAACACCGA

Query= MSMg01no150_o15.b1 MSMg01no150_o15.b1 CHROMAT_FILE:
MSMg01no150_o15.b1 PHD_FILE: MSMg01no150_o15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:35 2005
         (568 letters)



>mm_chr11_13323929_13324896
          Length = 968

 Score = 1062 bits (549), Expect = 0.0
 Identities = 561/565 (99%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctgctacagatacgtgagaagtgaaatctcagagatcatctagcaggctgagat 63
           |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgctacagaaatgtgagaagtgaaatctcagagatcatctagcaggctgagat 263

                                                                       
Query: 64  ggagccacacagctatgaggcctctgaccacaccttcaagaaaaatacacacactggctc 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggagccacacagctatgaggcctctgaccacaccttcaagaaaaatacacacactggctc 323

                                                                       
Query: 124 ttctacagcccacacctgccagaatttctcaggtagtgtgtctgcagaccttgtctgctc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttctacagcccacacctgccagaatttctcaggtagtgtgtctgcagaccttgtctgctc 383

                                                                       
Query: 184 tctgctctctttgttccctctgcagacccaacccctcactctcttccctagcactgcaac 243
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tctgctctctttgtttcctctgcagacccaacccctcactctcttccctagcactgcaac 443

                                                                       
Query: 244 agaactacacctacactctgcctcctttcactcttgcccatgactcctgtgcatctcaca 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agaactacacctacactctgcctcctttcactcttgcccatgactcctgtgcatctcaca 503

                                                                       
Query: 304 gaccaccccctcctgaccactcttccccactgtcactgtgtctccaacaccaacagacat 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gaccaccccctcctgaccactcttccccactgtcactgtgtctccaacaccaacagacat 563

                                                                       
Query: 364 tccctgtgaacacagtaagtgagaaggctagtaacacaggtaacacagctatcccactcc 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tccctgtgaacacagtaagtgagaaggctagtaacacaggtaacacagctatcccactcc 623

                                                                       
Query: 424 ctgaaaattcagagaggaaacagacaccaaggaacaaaacaccctcccaagaaagagcaa 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ctgaaaattcagagaggaaacagacaccaaggaacaaaacaccctcccaagaaagagcaa 683

                                                                       
Query: 484 ccctgtaatcagcacctacaccaataattacacaaacacacatgcttaggtgggaccaat 543
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 684 ccctgtaatcagcacctacaccaataattacacaaatacacatgcttaggtgggaccaat 743

                                    
Query: 544 ttaagtactgaatgggataaaggtg 568
           |||||||||||||||||||||||||
Sbjct: 744 ttaagtactgaatgggataaaggtg 768


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 968
Length adjustment: 10
Effective length of query: 558
Effective length of database: 958
Effective search space:   534564
Effective search space used:   534564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)