Query= MSMg01no151_m08.b1 MSMg01no151_m08.b1 CHROMAT_FILE:
MSMg01no151_m08.b1 PHD_FILE: MSMg01no151_m08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:40 2005
(372 letters)
>mm_chr11_71586412_71587188
Length = 777
Score = 638 bits (330), Expect = 0.0
Identities = 358/370 (96%), Gaps = 5/370 (1%)
Strand = Plus / Plus
Query: 5 gaattcagtggggtacccaataaggacacccacacaagtgccca-----gcctgtggcta 59
||||||||||||| | |||||||||||||||||||||||||| |||||||||||
Sbjct: 205 gaattcagtgggggagggaataaggacacccacacaagtgcccagccctgcctgtggcta 264
Query: 60 gaaggaaataatgcacctgaaattctgagccattcccccagaggatccctaaccccagct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gaaggaaataatgcacctgaaattctgagccattcccccagaggatccctaaccccagct 324
Query: 120 tcctccaaaatgtagaatgtaactggtttagagccagagaaaagaagagcctgctttgga 179
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 325 tcctccaaaatgtagaatgtaactggtttagagccagagaaaagcagagcctgctttgga 384
Query: 180 ggggccaggggctttccaaagcctatctgctttaatcttctcagcaagggacctcctccc 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 385 ggggccaggggctttccaaagcctatctgctttaatcttctcagcaagggacctcctcgc 444
Query: 240 gctccctggtagctgcaggaggcagctcaggtttgcagagggataagcttgtacacaggc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gctccctggtagctgcaggaggcagctcaggtttgcagagggataagcttgtacacaggc 504
Query: 300 agagctagaactcctgaatccaccatctgtgcttttccacactgcaacctctccttgcga 359
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agagctagaactcctgaatcctccatctgtgcttttccacactgcaacctctccttgcga 564
Query: 360 cagaaggtga 369
||||||||||
Sbjct: 565 cagaaggtga 574
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 777
Length adjustment: 9
Effective length of query: 363
Effective length of database: 768
Effective search space: 278784
Effective search space used: 278784
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no151_m08.g1 MSMg01no151_m08.g1 CHROMAT_FILE:
MSMg01no151_m08.g1 PHD_FILE: MSMg01no151_m08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:40 2005
(345 letters)
>mm_chr11_71724140_71724884
Length = 745
Score = 652 bits (337), Expect = 0.0
Identities = 343/345 (99%)
Strand = Plus / Minus
Query: 1 gcatcagaagccatagctgggggctggcagtccccaccatacactgtgtctccaaggtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gcatcagaagccatagctgggggctggcagtccccaccatacactgtgtctccaaggtca 486
Query: 61 tctgaagtggacatgctttagtttgcactataagaattgatgtctttagaaatgatgttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tctgaagtggacatgctttagtttgcactataagaattgatgtctttagaaatgatgttc 426
Query: 121 ttagccaatgacatcatctttctttatgggtctggtgtcatgttcagctctaataggagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ttagccaatgacatcatctttctttatgggtctggtgtcatgttcagctctaataggagt 366
Query: 181 gtatatagcatccaaagtgtgttctgtggtccaagatgtattcacaacccttatattgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gtatatagcatccaaagtgtgttctgtggtccaagatgtattcacaacccttatattgcc 306
Query: 241 aatcttcattttgatgaaatgctagattatgaccacaaatgtccgaattgtgtcacatac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 aatcttcattttgatgaaatgctagattatgaccacaaatgtccgaattgtgtcacatac 246
Query: 301 tcctaacaaaatcactgtcaatgggataactgtacaaagtgtcca 345
||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 245 tcctaacaaaatcactgtcaacaggataactgtacaaagtgtcca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
