Query= MSMg01no151_m16.b1 MSMg01no151_m16.b1 CHROMAT_FILE:
MSMg01no151_m16.b1 PHD_FILE: MSMg01no151_m16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:42 2005
(246 letters)
>mm_chr11_112119055_112119700
Length = 646
Score = 381 bits (197), Expect = e-110
Identities = 212/217 (97%)
Strand = Plus / Minus
Query: 5 gaattctccttatggtctgaaaatgttcatagttgaccttagagcactgattgtattgct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaattctccttatggtctgaaaatgttcatagttgaccttagagcactgattgtattgct 362
Query: 65 gactctcttaaacttctaaataattttagtattccctacactttatttttgcataagacc 124
||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 361 gactcccttaaacttctaaataattttagtattccctacactttatttttgtataagacc 302
Query: 125 atgaattgggagaacaaaagtaaagtgaattttaatttgtggttgttaatttgtggaata 184
|||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 301 atgaattgggagaacaaaagtaaagtgaattttaatttgtggctgttaattggtggaata 242
Query: 185 ttctgtggcttatcctggaaacttatctgaaaactct 221
||||||||||||||| |||||||||||||||||||||
Sbjct: 241 ttctgtggcttatcccggaaacttatctgaaaactct 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no151_m16.g1 MSMg01no151_m16.g1 CHROMAT_FILE:
MSMg01no151_m16.g1 PHD_FILE: MSMg01no151_m16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:42 2005
(346 letters)
>mm_chr11_112006766_112007509
Length = 744
Score = 609 bits (315), Expect = e-179
Identities = 337/345 (97%), Gaps = 3/345 (0%)
Strand = Plus / Plus
Query: 1 tctgacagtttattgttatatttttcgatcataatcataagtaggatggaatatcacttg 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 200 tctgacagtttattgttatattttttgatcataatcataagtaggatggaatatcacttg 259
Query: 61 acttgaatatcacttgggaatttagttactattacaatctaccagtgtgaatgtgtctca 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 260 acttgaatatcacttgggaatttagttactattacaatctatcagtgtgaatgtgtctca 319
Query: 121 tctttatacgctaacctcaagaggatcttgtagcgctgacaaaactgaaataaaaaaa-g 179
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 320 cctttatatgctaacctcaagaggatcttgtagcgctgacaaaactgaaataaaaaaaag 379
Query: 180 aaaatataaaaataataaaaaaacaaacaagtaaggaaagccaggaatgacaattttagc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aaaatataaaaataataaaaaaacaaacaagtaaggaaagccaggaatgacaattttagc 439
Query: 240 atgtattatgtagggatggagaccaatatgctaatatactgcaactctgtgtgtttaccc 299
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 440 atgtattatgtagggatggagaccaatatgctaatatactgcaactctgtgttttt--cc 497
Query: 300 tgttcaaaagcttattgctaattaaaataaacatccgattcttaa 344
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tgttcaaaagcttattgctaattaaaataaacatccgattcttaa 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 744
Length adjustment: 9
Effective length of query: 337
Effective length of database: 735
Effective search space: 247695
Effective search space used: 247695
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
