Query= MSMg01no152_b11.b1 MSMg01no152_b11.b1 CHROMAT_FILE:
MSMg01no152_b11.b1 PHD_FILE: MSMg01no152_b11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:16:06 2005
(655 letters)
>mm_chr11_15243209_15244263
Length = 1055
Score = 1189 bits (615), Expect = 0.0
Identities = 642/651 (98%)
Strand = Plus / Plus
Query: 5 gaattctttaccttagaccctgttcagaaaatcttcccaagaattctgacacatttaata 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttaccttagaccctgttcagaaaatcttcccaagaattctgacacatttaata 264
Query: 65 aatccctaaagagattcagggaatataaaagtgaggaatataaaagtatggtgatttcgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatccctaaagagattcagggaatataaaagtgaggaatataaaagtatggtgatttcgt 324
Query: 125 gagaaatatatacattaataaatatcatcactatctgactagggttaataatttaaataa 184
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gacaaatatatacattaataaatatcatcactatctgactagggttaataatttaaataa 384
Query: 185 tatatttatatattaaaagctataatgaatgaataaacatcacaattaacataattgaaa 244
||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 385 tatatttatatatcaaaagctataatgaatgaataaacataacaattaacataattgaaa 444
Query: 245 tttacgaaatatggccaaaaattggaaagtaaaaaaggtgcaagtgccccacaaaatgac 304
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttacgaaatacggccaaaaattggaaagtaaaaaaggtgcaagtgccccacaaaatgac 504
Query: 305 tcattgtccacacttttatcattttaatgtctttgcagataattctctatttaattcctt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tcattgtccacacttttatcattttaatgtctttgcagataattctctatttaattcctt 564
Query: 365 agaaacttgcatcaaaataaaacctaattgaaaaaattgttttctttttttgacataaat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agaaacttgcatcaaaataaaacctaattgaaaaaattgttttctttttttgacataaat 624
Query: 425 tgctgtttctaatcagtctgttcatccttcttaaagctggattcatgatatgtttagtgg 484
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 625 tgctgtttctaatcagtctgttcatccttcttaaagctggattcacgatatgtttagtgg 684
Query: 485 acaggtctggtcaacacaagacttaagtcttcattgaagtcagaagaccctcgtcctcat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 acaggtctggtcaacacaagacttaagtcttcattgaagtcagaagaccctcgtcctcat 744
Query: 545 cttcaaacttgagaacaggtaaaaaggatgggataggagaattatagttcactgagatga 604
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 745 cttcaaacttgagaacaggtaaaaaggatgggataggagaattatagtttactgagatga 804
Query: 605 ctgcagccttaacaatgatatatgtgaaagtagaggacctacaaaatagac 655
|||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 805 ctgcagccttaaaaatgatatatgtgaaagtagaggatttacaaaatagac 855
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no152_b11.g1 MSMg01no152_b11.g1 CHROMAT_FILE:
MSMg01no152_b11.g1 PHD_FILE: MSMg01no152_b11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:16:06 2005
(618 letters)
>mm_chr11_15304588_15305605
Length = 1018
Score = 1096 bits (567), Expect = 0.0
Identities = 606/619 (97%), Gaps = 2/619 (0%)
Strand = Plus / Minus
Query: 1 ctcacctaccgttagtatattaggtctgtcttttttaatttctacagttccaacaacttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 ctcacctaccgttagtatattaggtctgtcttttttaatttctacagttccaacaacttc 759
Query: 61 aataaaattatcatgtacaatttaacagcggcattaatgaagctgagtagtctataacat 120
||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 758 aataaaattatcatgtacaatttaacagcagcattaatgaagctgactagtctataacat 699
Query: 121 gcagaagcagttttatcacccattaaaatacctg-attaatatatttttatcccaactac 179
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 698 gcagaagcagttttatcacccattaaaataactgaattaatatatttttatcccaactac 639
Query: 180 tgaagagttaatccaataacagtttcataatgaaaaaaaaaacctggaaatattttctct 239
|||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 638 tgaagagttaatccaataacagtttcataatgaaaaaaaaaaactgaaaatattttctct 579
Query: 240 gattcagttaatgataaaaactttaaagccagaaatcacaacgtataaacagaatgtact 299
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 578 gattcagttaatgataaaaactttaaagccagaaatcacaaggtataaacagaatgtact 519
Query: 300 tttaaatttgagttcttcaacgttactatacaccttaaagcatctacaaaaatatattaa 359
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 518 tttaaatttgagttcttcaatgttactatacaccttaaagcatctacaaaaatatattaa 459
Query: 360 atgtgtgatatttccaatacacagatccataggaaaaggaaatctagccaacaccacagg 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 gtgtgtgatatttccaatacacagatccataggaaaaggaaatctagccaacaccacagg 399
Query: 420 tttcttaaccagtttcctgggtattaaaaagctatgcctcctgaaaattcctgtggtcag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 tttcttaaccagtttcctgggtattaaaaagctatgcctcctgaaaattcctgtggtcag 339
Query: 480 aagagtaaaagtcactgtgttctaagagaaacaacagtttcattttgtagctctaaaaat 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 cagagtaaaagtcactgtgttctaagagaaacaacagtttcattttgtagctctaaaaat 279
Query: 540 aatgtactatggaaacactgagtgtttagttttgatagaaataaaataggacatgcaatc 599
|||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||
Sbjct: 278 aatgtactatggaaacactgagtgtttagttttgatagaattaaa-taggacttgcaatc 220
Query: 600 tctgatattacaatgaaaa 618
|||||||||||||||||||
Sbjct: 219 tctgatattacaatgaaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space: 612864
Effective search space used: 612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
