Query= MSMg01no152_i20.b1 MSMg01no152_i20.b1 CHROMAT_FILE:
MSMg01no152_i20.b1 PHD_FILE: MSMg01no152_i20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:16:40 2005
(430 letters)
>mm_chr11_84080766_84081597
Length = 832
Score = 770 bits (398), Expect = 0.0
Identities = 422/432 (97%), Gaps = 6/432 (1%)
Strand = Plus / Minus
Query: 1 caagacagtcagggctacacagaaaaaccctgtcttgaaaagccagggg-aaaaagaaga 59
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 484 caagacagtcagggctacacagaaaaaccctgtcttgaaaagccaggggaaaaaagaaga 425
Query: 60 ctaatttaattttattgtatgtacttatgcgccacatgtatgcagaagctcagcgtggag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ctaatttaattttattgtatgtacttatgcgccacatgtatgcagaagctcagcgtggag 365
Query: 120 aggagaggtgtggaaccctctagaactagagttgcaggcggctgtgactctgcagtaagt 179
|||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 aggagaggcgagggaccctctagaactagagttgcaggcggctgtgactctgcagtaagt 305
Query: 180 gctattactgttgaaccgtctctcca-tcataatcaccaaaccccctcttctaaacaggc 238
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 304 gctatgactgttgaaccgtctctccagtcataatcaccaaaccccctcttctaaacaggc 245
Query: 239 atttctcagtatctggcccgacgctggccttaaatttggcaatcttcctgcctcggtctc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 atttctcagtatctggcccgacgctggccttaaatttggcaatcttcctgcctcggtctc 185
Query: 299 ccaagtgacctgctatgtattcttcttcagaaataattactcaggtgaatttataataat 358
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 184 ccaagtgacctgctatgtattcttcttcagaaata----ctcaggtgaatttataataat 129
Query: 359 tattcttttgttctctttacatttatcactgatatatctaacttcttatatcctggtttt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 tattcttttgttctctttacatttatcactgatatatctaacttcttatatcctggtttt 69
Query: 419 gaacctgattaa 430
||||||||||||
Sbjct: 68 gaacctgattaa 57
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 832
Length adjustment: 9
Effective length of query: 421
Effective length of database: 823
Effective search space: 346483
Effective search space used: 346483
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no152_i20.g1 MSMg01no152_i20.g1 CHROMAT_FILE:
MSMg01no152_i20.g1 PHD_FILE: MSMg01no152_i20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:16:40 2005
(155 letters)
>mm_chr11_83958577_83959131
Length = 555
Score = 292 bits (151), Expect = 6e-84
Identities = 154/155 (99%)
Strand = Plus / Plus
Query: 1 agtcttcctgcctcggctgtctagtgctaggatcattcctgagccatagcacctggctct 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 agtcttcctgcctcggctgtctagtgctagaatcattcctgagccatagcacctggctct 260
Query: 61 caagcaatccttctaacatcccacaaatacagccatttactcaatgccattaggcaatag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caagcaatccttctaacatcccacaaatacagccatttactcaatgccattaggcaatag 320
Query: 121 cttcaaaagttcaaagtagaggttttttaaatgtg 155
|||||||||||||||||||||||||||||||||||
Sbjct: 321 cttcaaaagttcaaagtagaggttttttaaatgtg 355
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 155
Length of database: 555
Length adjustment: 8
Effective length of query: 147
Effective length of database: 547
Effective search space: 80409
Effective search space used: 80409
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
