Query= MSMg01no153_b11.b1 MSMg01no153_b11.b1 CHROMAT_FILE:
MSMg01no153_b11.b1 PHD_FILE: MSMg01no153_b11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:23 2005
(461 letters)
>mm_chr11_20859123_20859983
Length = 861
Score = 847 bits (438), Expect = 0.0
Identities = 450/454 (99%)
Strand = Plus / Plus
Query: 8 gaattccaaatgttcctgataagggtctagttctgcttccttcaggtgtcttcagctcct 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattccaaatgttcctgataagggtctagttctgcttccttcaggtgtcttcagctcct 267
Query: 68 gggcattaactgaacatctacttataaatggggaggacacagataaatgaagcaatggct 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gggcattaactgaacatctacttataaatggggaggacacagataaatgaagcaatggct 327
Query: 128 tttgtaggttcacagaccactaggaaggcaacataaatgcatctagcagtagctgcctct 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tttgtaggttcacagaccactaggaaggcaacataaatgcatctagcagtagctgcctct 387
Query: 188 gtcgagggtcacagccaatggtgtgagcatgaagtgtccttcccagaccatttgttaaag 247
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gttgagggtcacagccaatggtgtgagcatgaagtgtccttcccagaccatttgttaaag 447
Query: 248 cccattggttatcagccagtaggctttgggaaattgattggattctgaaagctccaatcc 307
|||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 448 cccattggttatcagccagtgggctttgggaaattgattggattctgaaagctccgatcc 507
Query: 308 aatcaatgggttcatcctttgatgcattaataacttgatagtatcaacggaagatggcag 367
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 508 aatcaatgggttcatcctttgatgcattaataacttgatagtatcaacagaagatggcag 567
Query: 368 aaggtaggaaatgaggcctagtatacgcttaggggatgtatcttgccctggctgcttcct 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 aaggtaggaaatgaggcctagtatacgcttaggggatgtatcttgccctggctgcttcct 627
Query: 428 ggattccatctctctgctttctgtcctcccagag 461
||||||||||||||||||||||||||||||||||
Sbjct: 628 ggattccatctctctgctttctgtcctcccagag 661
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 861
Length adjustment: 10
Effective length of query: 451
Effective length of database: 851
Effective search space: 383801
Effective search space used: 383801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no153_b11.g1 MSMg01no153_b11.g1 CHROMAT_FILE:
MSMg01no153_b11.g1 PHD_FILE: MSMg01no153_b11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:23 2005
(582 letters)
>mm_chr11_20993083_20994067
Length = 985
Score = 1100 bits (569), Expect = 0.0
Identities = 580/585 (99%), Gaps = 3/585 (0%)
Strand = Plus / Minus
Query: 1 tatagccctttacacctatctactgggcaaccacagtggagcacattctaaatcaaggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 tatagccctttacacctatctactgggcaaccacagtggagcacattctaaatcaaggga 726
Query: 61 cttaactgacattttgacaagtaaaacagaagcagaaactaaggcaaatgggaaccctct 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 725 cttaactgacattttgacaagtaaaacagaagcagaaactaaggcaaataggaaccctct 666
Query: 121 gaggcttccctctgaaaactgcctcaatagctctgtttcctgccctgtaatgttcagcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 gaggcttccctctgaaaactgcctcaatagctctgtttcctgccctgtaatgttcagcca 606
Query: 181 tttgttttaaagcatcccaaagaactcaggaaggcagcaaacccagacttcactaacttc 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tttgttttaaagcatcctaaagaactcaggaaggcagcaaacccagacttcactaacttc 546
Query: 241 tgcctctggactcttggaatcggacaggacaaaagcac---tgttagtgggttccttaaa 297
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 545 tgcctctggactcttggaatcggacaggacaaaagcactgttgttagtgggttccttaaa 486
Query: 298 agtacaaatggtcctggtagagctggctggtaagtactatcagaaaaggtcaatacaagg 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 agtacaaatggtcctggtagagctggctggtaagtactatcagaaaaggtcaatacaagg 426
Query: 358 ttacttaaatgctaattttaaggaacacacaaataaccgccaagtctccaactaaggtgg 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ttacttaaatgctaattttaaggaacacacaaataaccgccaagtctccaactaaggtgg 366
Query: 418 tttccagtttacactaaaaacctaggtggttaagattccttaaatttatcagatgaaaca 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tttccagtttacactaaaaacctaggtggttaagattccttaaatttatcagatgaaaca 306
Query: 478 ctataaccatataagcaatcttctatacatttaagtgttccattttcaaattgctcaaca 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ctataaccatataagcaatcttctatacatttaagtgttccattttcaaattgctcaaca 246
Query: 538 gatctcttaacaaacttcagaaaggggataggttggggaacagaa 582
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gatctcttaacaaacttcagaaaggggataggttggggaacagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 985
Length adjustment: 10
Effective length of query: 572
Effective length of database: 975
Effective search space: 557700
Effective search space used: 557700
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
