Query= MSMg01no153_b22.b1 MSMg01no153_b22.b1 CHROMAT_FILE:
MSMg01no153_b22.b1 PHD_FILE: MSMg01no153_b22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:25 2005
(513 letters)
>mm_chr11_53142868_53143780
Length = 913
Score = 973 bits (503), Expect = 0.0
Identities = 510/513 (99%), Gaps = 2/513 (0%)
Strand = Plus / Plus
Query: 1 agagtgaagcccgtgctggctctgtctgtggcaggatcgagcctactctcctcatcaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagtgaagcccgtgctggctctgtctgtggcaggatcgagcctactctcctcatcaggg 260
Query: 61 agcagagactcatttgggaaacctttgaggtacaagcacagggtagaagtcgggctgaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcagagactcatttgggaaacctttgaggtacaagcacagggtagaagtcgggctgaga 320
Query: 121 tgtagctcagtttgcagagtgcttgcctagcatgcacaaggttctgagatccatccgtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtagctcagtttgcagagtgcttgcctagcatgcacaaggttctgagatccatccgtga 380
Query: 181 cgctgtgtaagggaagcggaggggtcaagcgttcagcagcatcttcaggcctagcctagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgctgtgtaagggaagcggaggggtcaagcgttcagcagcatcttcaggcctagcctagg 440
Query: 241 ctacgtgagaccttgtctcaaagaagacaaagaagaactttcactacttagagttgatct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctacgtgagaccttgtctcaaagaagacaaagaagaactttcactacttagagttgatct 500
Query: 301 gaaaaagaaaaaagtgaaattgtatgaggtatagagtgcttgccctgcatgtaccagccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaaaaagaaaaaagtgaaattgtatgaggtatagagtgcttgccctgcatgtaccagccc 560
Query: 361 tggacttgaacctgcaccgagtattgtagtgataggagcattctgtagcctgaaagctgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tggacttgaacctgcaccgagtattgtagtgataggagcattctgtagcctgaaagctgg 620
Query: 421 gctgtgtgcgtgctgatggcggaaacgctgctcatgctcccctgctctctgtgggctcag 480
|||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 621 gctgtgtgcg--ctgatggcggaaacgctgctcacgctcccctgctctctgtgggctcag 678
Query: 481 ggaacagcagtcttgcagtgttgagtttccatg 513
|||||||||||||||||||||||||||||||||
Sbjct: 679 ggaacagcagtcttgcagtgttgagtttccatg 711
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space: 454209
Effective search space used: 454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no153_b22.g1 MSMg01no153_b22.g1 CHROMAT_FILE:
MSMg01no153_b22.g1 PHD_FILE: MSMg01no153_b22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:25 2005
(285 letters)
>mm_chr11_53333849_53334533
Length = 685
Score = 543 bits (281), Expect = e-159
Identities = 284/285 (99%)
Strand = Plus / Minus
Query: 1 tccctccctccaacagccctgggccctcctccacctcctccctctcttcccctcctcccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 tccctccctccaacagccctgggccctcctccacctcctccctctcttcccctcctcccc 490
Query: 61 ttccagtcgaccagggcctcacatgctggcaagaggacacagcttccttcaccgtcacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ttccagtcgaccagggcctcacatgctggcaagaggacacagcttccttcaccgtcacag 430
Query: 121 cctagcctcccagacacacccaaatccagccttagacaccaagagtgcagacaaccccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 cctagcctcccagacacacccaaatccagccttagacaccaagagtgcagacaaccccca 370
Query: 181 aaaggcctccctccgcatgctatagcctggctcaagtccacagacaccccccttaggacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaggcctccctccgcatgctatagcctggctcaagtccacagacaccccccttaggacc 310
Query: 241 accaagggtcgtcagcctagagagaggcaggtccagactggggcc 285
|||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 309 accaaggggcgtcagcctagagagaggcaggtccagactggggcc 265
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
