NAACTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGAAGAGGAT
CCGCGGAATTCTCACCCGACCAATACCGAATGGCTGAGAAGCACCTGAAA
TAATGTTCAACACCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCT
GAGATTCCATCTCACACCATTCAGAATGGCTAAGATAAAAAATTCCAGTG
ACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACATTCCTCCATTGT
TGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGTGGTT
CCTCAGAAAACTGGACATAGTACTACCGGAGGATCCCACAATACTTCTCC
TGGGCATATATCCAGAAGATGTTCCAACCGGTAAGAAGATCACATGCTCC
ACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACC
CAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACA
CATTGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTA
GGCAAATGGATGGACCTGGAGAGCATCATCCTGAGTGAGGTAACTCAATC
ACAAAAGAACTCACATGATATTTACTCACTTATAAGTGTATATTACCCCA
GAAACTTAGAATACCCAAGATATAAGATACAATTTGCGAAACACATGAAG
CTTGGAAA

NTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTGATGTGGATTTTTCAAGG
GCCTTGAGGTAAGGGTCAGGCAAGTTTCATAAAAGCTCTTGTTAGCTTTT
ATGGAAGAAATGTTTATTATATATTTATTGATGAATCAATAATTGATAGA
ATTGGTACATTTTGAATTTCTCTCTCTTCCTTCATATATATATGTATGTG
TACATATATATGAATATATACATATATGTAAATATATATCTGAATATATA
ATTAAAGATATTGTTTATAAAACAGATAACACATAATACATAACTCAATA
ATTCATGAGGACACTTGTTAAGGTTGGAAGCTCCAAAAACATTTACAGTA
CAGAGAAGGGCATGATTTTGTTTGAAACACACATATTAATCACAAATCTC
TTAGTGTCCTTGTGTTGTTCTTAAATGGAACACATGTCCTTCAGTATAAT
AGATCCTTAACTACTCTATCTTTACCCCAATTCTTAACTCTGACATCATT
ATGATTATTTTTTAACTAACTATTCATAATGCATCTGACATATCTCCCCT
TACATTAAAGAGGAATTGTTTCAAAGTATGAGAACATTGGAACAACGATT
TTAAAATACTAAATCAAGAAAATATTTAAGAATAGTTCTATTTGAAGCTT
TCAG

Query= MSMg01no153_f01.g1 MSMg01no153_f01.g1 CHROMAT_FILE:
MSMg01no153_f01.g1 PHD_FILE: MSMg01no153_f01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:40 2005
         (625 letters)



>mm_chr11_39087666_39088690
          Length = 1025

 Score = 1137 bits (588), Expect = 0.0
 Identities = 600/604 (99%)
 Strand = Plus / Minus

                                                                        
Query: 22   gccttgaggtaagggtcaggcaagtttcataaaagctcttgttagcttttatggaagaaa 81
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 gccttgaggtaagggtcaggcaagtttcataaaagctcttgttagcttttatggaagaaa 966

                                                                        
Query: 82   tgtttattatatatttattgatgaatcaataattgatagaattggtacattttgaatttc 141
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 965  tgtttattatatatttattggtgaatcaataattgatagaattggtacattttgaatttc 906

                                                                        
Query: 142  tctctcttccttcatatatatatgtatgtgtacatatatatgaatatatacatatatgta 201
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905  tctctcttccttcatatatatatgtatgtgtacatatatatgaatatatacatatatgta 846

                                                                        
Query: 202  aatatatatctgaatatataattaaagatattgtttataaaacagataacacataataca 261
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 845  aatatatatctgaatatataattaaaaatattgtttataaaacagataacacataataca 786

                                                                        
Query: 262  taactcaataattcatgaggacacttgttaaggttggaagctccaaaaacatttacagta 321
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785  taactcaataattcatgaggacacttgttaaggttggaagctccaaaaacatttacagta 726

                                                                        
Query: 322  cagagaagggcatgattttgtttgaaacacacatattaatcacaaatctcttagtgtcct 381
            || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725  caaagaagggcatgattttgtttgaaacacacatattaatcacaaatctcttagtgtcct 666

                                                                        
Query: 382  tgtgttgttcttaaatggaacacatgtccttcagtataatagatccttaactactctatc 441
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665  tgtgttgttcttaaatggaacacatgtccttcagtataatagatccttaactactctatc 606

                                                                        
Query: 442  tttaccccaattcttaactctgacatcattatgattattttttaactaactattcataat 501
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605  tttaccccaattcttaactctgacatcattatgattattttttaactaactattcataat 546

                                                                        
Query: 502  gcatctgacatatctccccttacattaaagaggaattgtttcaaagtatgagaacattgg 561
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545  gcatctgacatatctccccttacattaaagaggaattgtttcaaagtatgagaacattgg 486

                                                                        
Query: 562  aacaacgattttaaaatactaaatcaagaaaatatttaagaatagttctatttgaagctt 621
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485  aacaacgatttttaaatactaaatcaagaaaatatttaagaatagttctatttgaagctt 426

                
Query: 622  tcag 625
            ||||
Sbjct: 425  tcag 422


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space:   624225
Effective search space used:   624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)