Query= MSMg01no153_h23.b1 MSMg01no153_h23.b1 CHROMAT_FILE:
MSMg01no153_h23.b1 PHD_FILE: MSMg01no153_h23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:53 2005
(567 letters)
>mm_chr11_108475166_108476132
Length = 967
Score = 994 bits (514), Expect = 0.0
Identities = 523/526 (99%)
Strand = Plus / Minus
Query: 1 agcaaggacactgaactaggaaccactagtggagtggcattccccatgttggtgttgaga 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 agcaaggactctgaactaggaaccactagtggagtggcattccccatgttggtgttgaga 467
Query: 61 tgtaaagactgcaccttactgcaaatgaagccagcagccttaccacattccaactttgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tgtaaagactgcaccttactgcaaatgaagccagcagccttaccacattccaactttgca 407
Query: 121 gcaacactgaggacagcagtaccaaaagaaacacaagctgcaagcgctcagacactccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gcaacactgaggacagcagtaccaaaagaaacacaagctgcaagcgctcagacactccca 347
Query: 181 gcacaggaggcaaagaccgggaagtctccctctctgggcaaggctttatgtacaagcttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gcacaggaggcaaagaccgggaagtctccctctctgggcaaggctttatgtacaagcttg 287
Query: 241 ttcctttttttcttttttttccatgtccaaacctctccagaaacctaaaactttcttaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ttcctttttttcttttttttccatgtccaaacctctccagaaacctaaaactttcttaga 227
Query: 301 tgaggttctgacataaaaaagagtgagttagttattggtttgctgtatattgcttttata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 tgaggttctgacataaaaaagagtgagttagttattggtttgctgtatattgcttttata 167
Query: 361 atgtttaggtatgggcctggattgcaagatggtacaatcactcctgaagtcagtctggtg 420
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 166 atgtttaggtatgggcctggattgcaagctggtacaatcactcctgaagtcagtctggtg 107
Query: 421 gttccttagaaaatcggaaatagttctacctgaggacccagctatgtcactcctgggcat 480
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 106 gttccttagaaaatcggaaatagttctacctgaggacccagctatgccactcctgggcat 47
Query: 481 atacccaaaagatgttccaacatataacaaggacacggtgctccac 526
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 atacccaaaagatgttccaacatataacaaggacacggtgctccac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space: 533049
Effective search space used: 533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no153_h23.g1 MSMg01no153_h23.g1 CHROMAT_FILE:
MSMg01no153_h23.g1 PHD_FILE: MSMg01no153_h23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:53 2005
(594 letters)
>mm_chr11_108328917_108329911
Length = 995
Score = 1120 bits (579), Expect = 0.0
Identities = 591/595 (99%), Gaps = 1/595 (0%)
Strand = Plus / Plus
Query: 1 aacttctgtgcctagtatcctgtttcttgtgccagccagatcctagtgatgatatcaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacttctgtgcctagtatcctgtttcttgtgccagccagatcctagtgatgatatcaacc 260
Query: 61 tcctctgttagttggcctagttgcc-tgacaagaagctggtttctgccctgtctctgctt 119
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 261 tcctctgttagttggcctagttaccctgacaagaagctggtttctgccctgtctctgctt 320
Query: 120 tccttggcttgtattggtgcttattttaggaacttcctaccagcgtagttttggacatgt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccttggcttgtattggtgcttattttaggaacttcctaccagcgtagttttggacatgt 380
Query: 180 tgaattggaggcagtgctgtttagtttgtatttgtcatggaattggaggctgagagtaat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaattggaggcagtgctgtttagtttgtatttgtcatggaattggaggctgagagtaat 440
Query: 240 atgaattggggttgtatatttggtaagcaaagccttcccttgctatttgaaataccagaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgaattggggttgtatatttggtaagcaaagccttcccttgctatttgaaataccagaa 500
Query: 300 gtatattggttaaccaggaaaagcagataaaactataactaaaataactgagggtagaca 359
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 501 gtatattggttaaccaggaaaagcagatacaactataactaaaataactgagggtagaca 560
Query: 360 taggaccctagttttataaacatgtattggtagggtggagcgggcgctactgaagggtag 419
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 561 taggaccctagttttataaacatgtattggtagggtggagcgggggctactgaagggtag 620
Query: 420 tctgaaggatatctctgaagggtaggatgactaaaagtcatttggtagttgactgacaaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctgaaggatatctctgaagggtaggatgactaaaagtcatttggtagttgactgacaaa 680
Query: 480 taagtgacaagctagggtaggaatcttttcagaaaacttattgtgaagggaaaatattaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 taagtgacaagctagggtaggaatcttttcagaaaacttattgtgaagggaaaatattaa 740
Query: 540 tattattgcttggtacctaggagcagctatgtatgaattaatagtttgtcctttt 594
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tattattgcttggtacctaggagcagctatgtatgaattaatagtttgtcctttt 795
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 995
Length adjustment: 10
Effective length of query: 584
Effective length of database: 985
Effective search space: 575240
Effective search space used: 575240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
