Query= MSMg01no153_k05.b1 MSMg01no153_k05.b1 CHROMAT_FILE:
MSMg01no153_k05.b1 PHD_FILE: MSMg01no153_k05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:03 2005
(648 letters)
>mm_chr11_86258400_86259448
Length = 1049
Score = 1230 bits (636), Expect = 0.0
Identities = 645/648 (99%), Gaps = 1/648 (0%)
Strand = Plus / Minus
Query: 1 ctaatagtggc-ataagaaaaccatgttacagattttcttcaaatcctgggactctggtt 59
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 ctaatagtggcaataagaaaaccatgttacagattttcttcaaatcctgggactctggtt 789
Query: 60 atcattttttagtgaatttgtcacctttttctcatcctgatttttataacttactcccct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 atcattttttagtgaatttgtcacctttttctcatcctgatttttataacttactcccct 729
Query: 120 tatagggagtaaatattttattttaatcaatggatatagaaaatcaaccactgatgtgcg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 tatagggagtaaatattttattttaatcaatggatatagaaaatcaaccactgatgtgcg 669
Query: 180 aatggacatttgtcagcggcagctcaggaatgatcttattaagtctgcttgctacttatc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 aatggacatttgtcagcggcagctcaggaatgatcttattaagtctgcttgctacttatc 609
Query: 240 atgtacttattaataatttatttgatttctgagtatgagcagatggtaaagtagtgtact 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 atgtacttattaataatttatttgatttctgagtatgagcagatggtaaagtagtgtact 549
Query: 300 agccacacacacaaaatgatttgggaacaagaaatcaatggagatatttgtgctggagaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 agccacacacacaaaatgatttgggaacaagaaatcaatggagatatttgtgctggagaa 489
Query: 360 ttcatcctgcagtgtgtggctcggtggaaacgatcgcacctctaattgcagagaaccata 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 488 ttcatcctgcagtgtgtggctcggtggaaacgatcgcacctctaattgcagagacccata 429
Query: 420 actgtggtgtaaaacagcgtctatgagcactggcgagcgatccagagaggcctgtggctt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 actgtggtgtaaaacagcgtctatgagcactggcgagcgatccagagaggcctgtggctt 369
Query: 480 acctacagtaaggttctcttgatagaagtctctaaaacgctggtgtttgcacttgaacac 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 acctacagtaaggttctcttgatagaagtctctaaaacgctggtgtttgcacttgaacac 309
Query: 540 actgaaggattgggcaagcaaggtgctttatatagcctggggtggttctgtcaccaagct 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 actgaaggattgggcaagcaaggtgctttatatagcctggggtggttctgtcaccaagct 249
Query: 600 tctctttcacatctgtccctgcgttttcattcttggggctactgtcgg 647
|||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 248 tctctttcacatctgtccctgcgttttcattcttggtgctactgtcgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1049
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1039
Effective search space: 662882
Effective search space used: 662882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no153_k05.g1 MSMg01no153_k05.g1 CHROMAT_FILE:
MSMg01no153_k05.g1 PHD_FILE: MSMg01no153_k05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:03 2005
(640 letters)
>mm_chr11_86088578_86089617
Length = 1040
Score = 1199 bits (620), Expect = 0.0
Identities = 635/640 (99%)
Strand = Plus / Plus
Query: 1 aaatgagctataaaactttaaaatgctactttagtaattattagaactaacaactatcta 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 aaatgagctataaaactttaaaatgctactttagtaattattagaactaaaaactatcta 260
Query: 61 ctaggattcgttaggaattggtacagaaatactaataccttaagaaaaagggggcattga 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctaggattcgttaggaattggcacagaaatactaataccttaagaaaaagggggcattga 320
Query: 121 tattgtgcttgagggcatgctgaccagaaccagtcaggtaatggacccgctttggcagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tattgtgcttgagggcatgctgaccagaaccagtcaggtaatggacccgctttggcagtt 380
Query: 181 gatacaaagtatccaagggccaatggttgttgaagaatattagttacttcatcatgcgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatacaaagtatccaagggccaatggttgttgaagaatattagttacttcatcatgcgat 440
Query: 241 tctgttgaaagtagccgatcagtaccctgacccttaaaaagacaagagtattattagttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctgttgaaagtagccgatcagtaccctgacccttaaaaagacaagagtattattagttc 500
Query: 301 atttaatacatctctagacaacaaatataaatacaaatgcttacaacaattaataatctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 501 atttaatacatctctagacaacaaatataaatacaaatgcttacaacaattaataatttc 560
Query: 361 atattactatctcaataaaccacataaaatactaaaaattaaatggttatttacttaaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atattactatctcaataaaccacataaaatactaaaaattaaatggttatttacttaaga 620
Query: 421 gtctcaattagtactacatctaacctggtgacaggccaataatatctactactcagagct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtctcaattagtactacatctaacctggtgacaggccaataatatctactactcagagct 680
Query: 481 aaagcaggaggataaaaagaagttaaaggcctgtgtaggctacaaagttcaaggttagtc 540
||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 681 aaagcaggaggataaaaagaagttaaaggcccgtgtaggctacaacgttcaaggttagtc 740
Query: 541 tggacaactctcagctagaccatctcaaaagaaaaaaagagggctgaggatctaggttca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tggacaactctcagctagaccatctcaaaagaaaaaaagagggctgaggatctaggttca 800
Query: 601 cgggagcatacctgtctaacatatgtgacatttaaattta 640
||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 cgggagcatacctgtctaacatatgtgacatttaaattta 840
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space: 648900
Effective search space used: 648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
