Query= MSMg01no153_k15.b1 MSMg01no153_k15.b1 CHROMAT_FILE:
MSMg01no153_k15.b1 PHD_FILE: MSMg01no153_k15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:05 2005
(565 letters)
>mm_chr11_9477113_9478077
Length = 965
Score = 1023 bits (529), Expect = 0.0
Identities = 556/565 (98%)
Strand = Plus / Minus
Query: 1 caccatcatgtgcatgtatggacaaggctgtggcccagcttccttaagatgttaagccag 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 765 caccatcatgtgcatgtatggacaaggctgtggtccagcttccttaagatgttaagccag 706
Query: 61 gatacagtggcactttggcaagacacactttactgtggtctttcctctgccaccaataag 120
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 705 gatacagtggcactttggcaagacacactttattgtggtctttcctctgccaccaataaa 646
Query: 121 tcaacacctgaggatccccgagaagcactttggaaacaaaacagtgaatccctgtgtggg 180
|||||||| |||||| ||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 645 tcaacacccgaggattcccgagaagcactttgggaacaaaacagtgaatccctatgtggg 586
Query: 181 cctgacctgactcatgcatgcagcatcccttaaaacatcacagaaatttttgctgtcagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 cctgacctgactcatgcatgcagcatcccttaaaacatcacagaaatttttgctgtcagt 526
Query: 241 cactctccctaaaggcttggttcccagatggcggcactattttcaacgattctgtaaact 300
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 525 cactctccctaaaggcttggttcccagatggtggcactattttcaacgattctgtaaact 466
Query: 301 tgagcatgaagactctgggtggagagaggagaacatagaaagcagacctctgaagagtgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 tgagcatgaagactctgggtggagagaggagaacatagaaagcagacctctgaagagtgt 406
Query: 361 acctagttcttaggatcttccttgccctcaccaggaggtgagcaccctcctcctacacat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 acctagttcttaggatcttccttgccctcaccaggaggtgagcaccctcctcctacacat 346
Query: 421 ggtcttgccaggccctaattaaaagtgaaagtcctttacattgtgagagtcagcttcttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ggtcttgccaggccctaattaaaagtgaaagtcctttacattgtgagagtcagcttcttt 286
Query: 481 atcacagtggtaacagagttacgtggtgggcatctgcactctcctgtcacttgcaccttt 540
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 285 atcacagtggtaacagagttacgtggtgggcatctgcactctcctgtcactttcaccttt 226
Query: 541 ggaaatgggccactgacactgcatc 565
|||||||||||||||||||||||||
Sbjct: 225 ggaaatgggccactgacactgcatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space: 530025
Effective search space used: 530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no153_k15.g1 MSMg01no153_k15.g1 CHROMAT_FILE:
MSMg01no153_k15.g1 PHD_FILE: MSMg01no153_k15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:05 2005
(614 letters)
>mm_chr11_9300683_9301697
Length = 1015
Score = 1160 bits (600), Expect = 0.0
Identities = 612/616 (99%), Gaps = 2/616 (0%)
Strand = Plus / Plus
Query: 1 ttgaaagatgagtgtgtcaattattcctgggatagagaatgtcttctatgcttatctaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ttgaaagatgagtgtgtcaattattcctgggatagagaatgtcttctatgcttatctaga 259
Query: 61 gcctcagagcaaatgcatgcatggcagttaaattaattt-tccaacttcaattaggtaac 119
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 260 gcctcagagcaaatgcatgcatggcagttaaattaatttctccaacttcaattaggtaac 319
Query: 120 aactcagtattgtgtttgttgcctttcttctggcactgggaattgaatctagtcactgaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aactcagtattgtgtttgttgcctttcttctggcactgggaattgaatctagtcactgaa 379
Query: 180 atataattgacaagtgctctactatttttaaaaacatttttcttttgagaaagatttctc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atataattgacaagtgctctactatttttaaaaacatttttcttttgagaaagatttctc 439
Query: 240 ttaaattaccccatctggccttgaactcgatctgtgatctgtatcccatttaggttttgc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttaaattaccccatctggccttgaactcgatctgtgatctgtatcccatttaggttttgc 499
Query: 300 aattttcctgcctcagctcccaagtagcagtaattataggcaagcaacaccaggcccacc 359
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 500 aattttcctgcctcagctcccaagtagcagcaattataggcaagcaacaccaggcccacc 559
Query: 360 tactctttttttgttgtttgttttttgtttttgtagccaaatatacttaatacagacata 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tactctttttttgttgtttgttttttgtttttgtagccaaatatacttaatacagacata 619
Query: 420 catacataggataaattgttctattcaatttttatctgttcccttgataaatttttatca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 catacataggataaattgttctattcaatttttatctgttcccttgataaatttttatca 679
Query: 480 tcttgattggactatatcccacctgcagcaactta-gaagcaatagatttgtgttaaaat 538
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 680 tcttgattggactatatcccacctgcagcaacttaagaagcaatagatttgtgttaaaat 739
Query: 539 taatcagttattcctagaataattaatacaaatgggacccttgctatctcctgcttataa 598
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 taatcagttatttctagaataattaatacaaatgggacccttgctatctcctgcttataa 799
Query: 599 actcctaaatgatata 614
||||||||||||||||
Sbjct: 800 actcctaaatgatata 815
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1015
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1005
Effective search space: 607020
Effective search space used: 607020
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
