Query= MSMg01no154_n10.b1 MSMg01no154_n10.b1 CHROMAT_FILE:
MSMg01no154_n10.b1 PHD_FILE: MSMg01no154_n10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:35 2005
(136 letters)
>mm_chr11_77242188_77242723
Length = 536
Score = 255 bits (132), Expect = 6e-73
Identities = 135/136 (99%)
Strand = Plus / Plus
Query: 1 tatacttgtggtaggacagagaaatagtgtagtattaaatgggccacctttatcatattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatacttgtggtaggacagagaaatagtgtagtattaaatgggccacctttatcatattc 260
Query: 61 ataatttttgatcctcaactggaagtgtacaccatatacctctcttaaagggaaaatcca 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 ataatttttgatcctcaactggaagtgtacaccataaacctctcttaaagggaaaatcca 320
Query: 121 ggggccagcaaggtgg 136
||||||||||||||||
Sbjct: 321 ggggccagcaaggtgg 336
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 136
Length of database: 536
Length adjustment: 8
Effective length of query: 128
Effective length of database: 528
Effective search space: 67584
Effective search space used: 67584
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no154_n10.g1 MSMg01no154_n10.g1 CHROMAT_FILE:
MSMg01no154_n10.g1 PHD_FILE: MSMg01no154_n10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:35 2005
(367 letters)
>mm_chr11_77386798_77387565
Length = 768
Score = 634 bits (328), Expect = 0.0
Identities = 358/368 (97%), Gaps = 2/368 (0%)
Strand = Plus / Minus
Query: 1 attctgtttttattgtctaattttaattattacgatgagaaattattgtgccacttgatt 60
||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 675 attctgtttttattgtctaatattaattattacgatgagaaattattgtggtacttgatt 616
Query: 61 actttttattttcattcttatagtattttta-ttttttttataattttaaatatattcta 119
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 615 actttttattttcattcttatagtatttttatttttttttataattttaaatatattcta 556
Query: 120 atgaaggaaagttgaataattttctgtgttccttaaaccagagatatcaaagcaggaaat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 atgaaggaaagttgaataattttctgtgttccttaaaccagagatatcaaagcaggaaat 496
Query: 180 atccttctgacagaatcaggtcaagtgaaacttgctgactttggatctgcttccatggct 239
||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 495 atccttctgacagaaccaggccaagtgaaacttgctgactttggatctgcttccatggct 436
Query: 240 tcccctgccatttcttttgtgggaacaccatattggtaagaatagttttatcttgcattg 299
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 435 tcccctgccaattcttttgtgggaacaccatattggtaagaatagttttatcttgtattg 376
Query: 300 atggtgattatactttctaagataatattttcctgaaaataagctaccatttttgttt-g 358
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 375 atggtgattatactttctaagataatattttcctgaaaataagctaccattttttttttg 316
Query: 359 tttgtttg 366
||||||||
Sbjct: 315 tttgtttg 308
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 768
Length adjustment: 9
Effective length of query: 358
Effective length of database: 759
Effective search space: 271722
Effective search space used: 271722
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
