Query= MSMg01no155_i14.b1 MSMg01no155_i14.b1 CHROMAT_FILE:
MSMg01no155_i14.b1 PHD_FILE: MSMg01no155_i14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:28 2005
(580 letters)
>mm_chr11_81560942_81561921
Length = 980
Score = 1054 bits (545), Expect = 0.0
Identities = 569/579 (98%), Gaps = 6/579 (1%)
Strand = Plus / Plus
Query: 5 ggaattctgtatatttcccaa---tattagctctgaagggagggaagaagccatatctct 61
||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||
Sbjct: 205 ggaattctgtatatttc--aaacatatta-ctctgaagggagggaagaagccatatctct 261
Query: 62 ggcagagtggcattcattctggtggcccatttccatagacctttgactttgcaagaatat 121
||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 262 ggcagagtgacattcattctggtggcccatttgcatagacctttgactttgcaagaatat 321
Query: 122 tttagctccaacctttctccctggtgctataaacacagggagtggggagcgtcatttctt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tttagctccaacctttctccctggtgctataaacacagggagtggggagcgtcatttctt 381
Query: 182 catttccagcagccatagaaattatttcccttatttctcaaaaccatggcaaattagcac 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 catttccagcagccatagaaattatttcccttatttctcaaaaccatggcaaattagcac 441
Query: 242 ctttgaccatccttttcaggcctgtcttcctcattcattgttgctgacacatgaacagtt 301
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 442 ctttgaccatccttttcaggcctgtcttcctcactcattgttgctgacacatgaacagtt 501
Query: 302 tatggtgttctgtgtaggcttccacttccttgcgtgctgctaaaaaaccttccagctggt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tatggtgttctgtgtaggcttccacttccttgcgtgctgctaaaaaaccttccagctggt 561
Query: 362 ggtctctcttccaatctgtctctatgcttgtctcaattctgtagaagtaaatctaaggca 421
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 562 ggtctctcttccaatctgtctctacgcttgtctcaattctgtagaagtaaatctaaggca 621
Query: 422 gcgtttccctaaagggcttttaaagctcaccaggtttatgaaatgttactaggtgtctca 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gcgtttccctaaagggcttttaaagctcaccaggtttatgaaatgttactaggtgtctca 681
Query: 482 ccaataaagtattttgtagccaataagttggaaaaacactggctgctgtggatttcagag 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ccaataaagtattttgtagccaataagttggaaaaacactggctgctgtggatttcagag 741
Query: 542 tacatatttgcacacagaagcatcataaatcctgcaata 580
|||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tacatatttgcacacagaagcatcataaatcctgcaata 780
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 980
Length adjustment: 10
Effective length of query: 570
Effective length of database: 970
Effective search space: 552900
Effective search space used: 552900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_i14.g1 MSMg01no155_i14.g1 CHROMAT_FILE:
MSMg01no155_i14.g1 PHD_FILE: MSMg01no155_i14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:28 2005
(564 letters)
>mm_chr11_81624653_81625616
Length = 964
Score = 439 bits (227), Expect = e-127
Identities = 230/231 (99%)
Strand = Plus / Minus
Query: 1 ctttccctttctgaacttgttctgcagccatttcctccatcctggagaaaggctcattat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ctttccctttctgaacttgttctgcagccatttcctccatcctggagaaaggctcattat 254
Query: 61 gactgaggaagtaaaggaaactcccaatttttaggaaccaaacaaaacccacaagtctca 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 253 gactgaggaagtaaaggaaactcacaatttttaggaaccaaacaaaacccacaagtctca 194
Query: 121 ggaagttcctgaaatttacaagattcataaaaccctgcctcaaagttacataagccacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ggaagttcctgaaatttacaagattcataaaaccctgcctcaaagttacataagccacaa 134
Query: 181 caatcactagggagaagccactctctgaccttctcagctgcctgaaaattc 231
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 caatcactagggagaagccactctctgaccttctcagctgcctgaaaattc 83
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space: 528516
Effective search space used: 528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
