Query= MSMg01no156_n03.b1 MSMg01no156_n03.b1 CHROMAT_FILE:
MSMg01no156_n03.b1 PHD_FILE: MSMg01no156_n03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:03 2005
(315 letters)
>mm_chr11_24216652_24217366
Length = 715
Score = 603 bits (312), Expect = e-177
Identities = 312/312 (100%)
Strand = Plus / Plus
Query: 4 ggaattctgttcttatagcttatttccgtgatagggagtctgaagcccaccctggctctc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgttcttatagcttatttccgtgatagggagtctgaagcccaccctggctctc 263
Query: 64 aacaaatctaaggtcacttgcctggtagtagaaccagagccttgattctttagtactgga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aacaaatctaaggtcacttgcctggtagtagaaccagagccttgattctttagtactgga 323
Query: 124 aacccaacaaggcctattcaggccagcatatgcagcagaattccatgtggcagaatatcc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aacccaacaaggcctattcaggccagcatatgcagcagaattccatgtggcagaatatcc 383
Query: 184 cagcaagcttattaaaagcagattcctggaccccaatgccagccactgaaaggagatttc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cagcaagcttattaaaagcagattcctggaccccaatgccagccactgaaaggagatttc 443
Query: 244 tcctgactcttgaacatctatctctgtttgagtcaaaagcttgctcttgacttctaaagt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcctgactcttgaacatctatctctgtttgagtcaaaagcttgctcttgacttctaaagt 503
Query: 304 ttgtcacagatg 315
||||||||||||
Sbjct: 504 ttgtcacagatg 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no156_n03.g1 MSMg01no156_n03.g1 CHROMAT_FILE:
MSMg01no156_n03.g1 PHD_FILE: MSMg01no156_n03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:03 2005
(286 letters)
>mm_chr11_24314887_24315572
Length = 686
Score = 509 bits (263), Expect = e-148
Identities = 281/287 (97%), Gaps = 2/287 (0%)
Strand = Plus / Minus
Query: 1 tttctactgttgtttttaaaaactaaatattttaattaaaattttagctcaaagagattc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 tttctactgttgtttttaaaaactaaatattttaattaaaattttagctcaaagagattt 473
Query: 61 ttaagttattcattttgaataaacttgaaatgtattcttgttgaaaagttcagtgtattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ttaagttattcattttgaataaacttgaaatgtattcttgttgaaaagttcagtgtattc 413
Query: 121 ctggaaagtaaaccctttagcaatactagaatggatgttaatttcttcacataaacacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ctggaaagtaaaccctttagcaatactagaatggatgttaatttcttcacataaacacaa 353
Query: 181 gcaatgggaga-ttttttttttcaggcaaagagcatggcttctgatttatttagaaaatc 239
||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 352 gcaatgggagatttttttttttcaggcaaagatcatggcttctgatttatttagaaaatc 293
Query: 240 aaatattttctcaactaaaataattatcaaaaaacatgaagaaacaa 286
|||||||||||||| ||||||||||||| ||||| ||||||||||||
Sbjct: 292 aaatattttctcaaataaaataattatc-aaaaatatgaagaaacaa 247
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
