XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCA
ATAGCTTCTAGTATGTAGTTAATTTCCTACCTGTCAGAAAAATGTATTGA
AATGCTCTTTCTTGAAAACGGAGTTAATTCAGAAGAGAAAGCAGTCGACT
TTCATGCTAAGAGAGAGAAAAAATTGTTCTCCAGTTCTTGTTGGAGGCAA
ATACTGTAATCTTTTACACACATGCACACACACACACACACACACACACA
CACACACACACACACACACACACAGAAAATGCCCTCTGGCTCCAAGGTTC
CAAATTGTTGGGATAACTGCCCAAGAAATGGCTGAGGAGAGAACTTTATG
CTCATTGCAATGTTGCAGAGATGCTCAAGCAGAGTATGTATAGAGAGATG
TGGATGCTAAGTAGGTCTTTCTAAAATGACATTCAGTTTTAAAATGAGTA
GAAATATTACACTCTAAGGACTGGAATCTTGGATGCTCTATTAGGCTTGG
TCTGTTTTTCCATGTTATAGTGAAACTATCTTAATTGAAGCAAAAGTCAC
TTAAGGGAGTGTCTAGGTATGACTGCTAAGTTCGTAGTAAGCTTTTGTGA
ATTTTGAGAGCCTATCCTTATTAGAAGAGCTAAAGACCTACTTTATGGAT
TAGCAATTGTGTGTCTTTGTGTTGTGGTAAGTAACATAAATTTTACATTC
TGTATGGTTATTCAGN

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXGTCATTCTGCTATATTCATAAGCCAGTGCCTG
TCTTGAACAAAGCCTTGCTCAGCTGTCATCAGAGAAGCTTCCTCCTCCAG
CTGATAGAAACAAGTACAGAGGCTCACAATTAGATACACAGAGAGTGAAA
GAACTTGGAATACTCAGCTGTAAAAATAATGTCAAAAAAGAAAGAAAGAA
AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG
AAAGAAAGAAAGAAAGGACAAAAGAATGTCTTCTTCAAGTCCCTCTCCTC
AGGACCCAGGTAGCCCTGTGCAAGATGAGATAGGAAGAGTGTAAGACACC
AAGGAAACAAAGCCCTCTAAATCAACATTATCAAAGATCATATGAATCTA
GAAAGTGTGAGGCAGCATGATCAGGGACTGCACAGGTCTGCACCTAGTCC
TTTATAAATATAATATGGGTCCCAGTAAGTGTTTTTATAGGATTCCTGAT
TCTGCAAATGGGGGTGGGTCTATGCCTTCTGTTCTTTCTCTGGATTTTTC
CCCAATCTGTTTGTATGTTTTGTCCAATTCTGATCTATTAAATTTAGTTT
TATTCTATTATTATCCCTTAGAAGCCCATTTGTTGTCTACCGAGAGAAAG
AAAGGGGGCGT

Query= MSMg01no157_a04.b1 MSMg01no157_a04.b1 CHROMAT_FILE:
MSMg01no157_a04.b1 PHD_FILE: MSMg01no157_a04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:16 2005
         (677 letters)



>mm_chr11_17609773_17610849
          Length = 1077

 Score = 1288 bits (666), Expect = 0.0
 Identities = 672/676 (99%), Gaps = 4/676 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaatagcttctagtatgtagttaatttcctacctgtcagaaaaatgtattgaaat 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaattcaatagcttctagtatgtagttaatttcctacctgtcagaaaaatgtattgaaat 260

                                                                       
Query: 65  gctctttcttgaaaacggagttaattcagaagagaaagcagtcgactttcatgctaagag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctctttcttgaaaacggagttaattcagaagagaaagcagtcgactttcatgctaagag 320

                                                                       
Query: 125 agagaaaaaattgttctccagttcttgttggaggcaaatactgtaatcttttacacacat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agagaaaaaattgttctccagttcttgttggaggcaaatactgtaatcttttacacacat 380

                                                                       
Query: 185 gcacacacacacacacacacacacacacacacacacacacacacacacaca----gaaaa 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||    |||||
Sbjct: 381 gcacacacacacacacacacacacacacacacacacacacacacacacacacacagaaaa 440

                                                                       
Query: 241 tgccctctggctccaaggttccaaattgttgggataactgcccaagaaatggctgaggag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgccctctggctccaaggttccaaattgttgggataactgcccaagaaatggctgaggag 500

                                                                       
Query: 301 agaactttatgctcattgcaatgttgcagagatgctcaagcagagtatgtatagagagat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agaactttatgctcattgcaatgttgcagagatgctcaagcagagtatgtatagagagat 560

                                                                       
Query: 361 gtggatgctaagtaggtctttctaaaatgacattcagttttaaaatgagtagaaatatta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtggatgctaagtaggtctttctaaaatgacattcagttttaaaatgagtagaaatatta 620

                                                                       
Query: 421 cactctaaggactggaatcttggatgctctattaggcttggtctgtttttccatgttata 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cactctaaggactggaatcttggatgctctattaggcttggtctgtttttccatgttata 680

                                                                       
Query: 481 gtgaaactatcttaattgaagcaaaagtcacttaagggagtgtctaggtatgactgctaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtgaaactatcttaattgaagcaaaagtcacttaagggagtgtctaggtatgactgctaa 740

                                                                       
Query: 541 gttcgtagtaagcttttgtgaattttgagagcctatccttattagaagagctaaagacct 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gttcgtagtaagcttttgtgaattttgagagcctatccttattagaagagctaaagacct 800

                                                                       
Query: 601 actttatggattagcaattgtgtgtctttgtgttgtggtaagtaacataaattttacatt 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 actttatggattagcaattgtgtgtctttgtgttgtggtaagtaacataaattttacatt 860

                           
Query: 661 ctgtatggttattcag 676
           ||||||||||||||||
Sbjct: 861 ctgtatggttattcag 876


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 74
Number of extensions: 25
Number of successful extensions: 25
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1077
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1067
Effective search space:   711689
Effective search space used:   711689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)