Query= MSMg01no157_g16.b1 MSMg01no157_g16.b1 CHROMAT_FILE:
MSMg01no157_g16.b1 PHD_FILE: MSMg01no157_g16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:45 2005
(319 letters)
>mm_chr11_59944120_59944838
Length = 719
Score = 598 bits (309), Expect = e-175
Identities = 312/313 (99%)
Strand = Plus / Minus
Query: 4 ggaattccagtttcctggtgatgctctgaagactgaatgtggaaactctgcttcactgtg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ggaattccagtttcctggtgatgctctgaagactgaatgtggaaactctgcttcactgtg 363
Query: 64 ctttcagatcaaaagctcctatacttggtgccatgaggaagtgaccaccaatacatgccc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ctttcagatcaaaagctcctatacttggtgccatgaggaagtgaccaccaatacatgccc 303
Query: 124 tgggctacagtgtctgtcttttcatgacctccgaatggcatttgaggggccctttgatca 183
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 302 tgggctacagtgtctgtcttttcatgacctccgaatggcattcgaggggccctttgatca 243
Query: 184 ggccagaaactagggttcaaaggggctcaagctgagaaaggtggcagccagggtgagatt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ggccagaaactagggttcaaaggggctcaagctgagaaaggtggcagccagggtgagatt 183
Query: 244 ctacctccaaataaggaagagcctgcttacaggcagagctgcccagaaatggaaggtgca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ctacctccaaataaggaagagcctgcttacaggcagagctgcccagaaatggaaggtgca 123
Query: 304 agcagcaactgtg 316
|||||||||||||
Sbjct: 122 agcagcaactgtg 110
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no157_g16.g1 MSMg01no157_g16.g1 CHROMAT_FILE:
MSMg01no157_g16.g1 PHD_FILE: MSMg01no157_g16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:45 2005
(287 letters)
>mm_chr11_59774359_59775044
Length = 686
Score = 524 bits (271), Expect = e-153
Identities = 283/289 (97%), Gaps = 5/289 (1%)
Strand = Plus / Plus
Query: 1 acggggtaaattaggcctgtactcagatggcatggatttattataattaa--ccccaagc 58
|||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 201 acggggtaaattaggcctgtactcagatggcatggatttattataattaaagc---aagc 257
Query: 59 tgtgagagtatgaacattgttttgaaaggccagagggtgggtggcttctcccttgaaaca 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tgtgagagtatgaacattgttttgaaaggccagagggtgggtggcttctcccttgaaaca 317
Query: 119 gttcacttccttttttgtttgaactactgaatgaaactatatctctgggggcgtcagccc 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gttcacttccttttttgtttgaactactgaatgaaactatatctctgggggcgtcagccc 377
Query: 179 agagctccacgatccagccaccaactccagtttccagcctcctgcatgctagccttatag 238
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 agagctccacgatctagccaccaactccagtttccagcctcctgcatgctagccttatag 437
Query: 239 gctcttgctccctttatctctatcacttcaggcagtgctcagaatagcc 287
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gctcttgctccctttatctctatcacttcaggcagtgctcagaatagcc 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 686
Length adjustment: 9
Effective length of query: 278
Effective length of database: 677
Effective search space: 188206
Effective search space used: 188206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|