Query= MSMg01no157_m06.b1 MSMg01no157_m06.b1 CHROMAT_FILE:
MSMg01no157_m06.b1 PHD_FILE: MSMg01no157_m06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:10 2005
(318 letters)
>mm_chr11_49486689_49487406
Length = 718
Score = 607 bits (314), Expect = e-178
Identities = 314/314 (100%)
Strand = Plus / Minus
Query: 5 gaattcagagggaacttgtctggctgcttttgtttcaactgcaggcagtggagcagaagg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gaattcagagggaacttgtctggctgcttttgtttcaactgcaggcagtggagcagaagg 459
Query: 65 acgccgtgtggcactaaagtgaactgttgagtgttaacagttttatacagagactgagcc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 acgccgtgtggcactaaagtgaactgttgagtgttaacagttttatacagagactgagcc 399
Query: 125 attttggatgactcaaaattttatgagaagacatttaattgcttatgctgtttttaagag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 attttggatgactcaaaattttatgagaagacatttaattgcttatgctgtttttaagag 339
Query: 185 gaaataaaattacatactgtttaaataaatgaattttttctttttaagaaattctctaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 gaaataaaattacatactgtttaaataaatgaattttttctttttaagaaattctctaaa 279
Query: 245 ggtcttgatatcttggaccttgtttttcctttaaggttttttgttttgtttgtttaatcg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ggtcttgatatcttggaccttgtttttcctttaaggttttttgttttgtttgtttaatcg 219
Query: 305 taattgtaatgttg 318
||||||||||||||
Sbjct: 218 taattgtaatgttg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no157_m06.g1 MSMg01no157_m06.g1 CHROMAT_FILE:
MSMg01no157_m06.g1 PHD_FILE: MSMg01no157_m06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:10 2005
(655 letters)
>mm_chr11_49346673_49347728
Length = 1056
Score = 1222 bits (632), Expect = 0.0
Identities = 650/656 (99%), Gaps = 3/656 (0%)
Strand = Plus / Plus
Query: 1 ctgccctagcttcccttaataatgaagataaaccacaaaattaactaagccctgtcctcc 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 201 ctgccctagcttcccttaataatgaagagaaaccacaaaattaactaagccctgtcctcc 260
Query: 61 aaaacttgtatttggtcagtgctttgtcacaccaacagaaagcaaactaattgtcttacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaacttgtatttggtcagtgctttgtcacaccaacagaaagcaaactaattgtcttacc 320
Query: 121 tcaggatggccttgaatccaccttactgctggaaagagttgtgaattcctgatccccccg 180
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 tcgggatggccttgaatccaccttactgctggaaagagttgtgaattcctgatcccccag 380
Query: 181 ccactacctcccaagcactcatgaagtaagaagaataactttgtatacacatgtctcatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccactacctcccaagcactcatgaagtaagaagaataactttgtatacacatgtctcatt 440
Query: 241 ttcattttt-atcaatgactacttacagctctcagtgttctcttctgaactttttaattt 299
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcattttttatcaatgactacttacagctctcagtgttctcttctgaactttttaattt 500
Query: 300 tttttttagtttttaaaataccacctcaagacattgccttagagttgacaaaatacattt 359
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttttt-agtttttaaaataccacctcaagacattgccttagagttgacaaaatacattt 559
Query: 360 aaaattaacactctactttagcatagccattttctcctgcaagggcaatctaagcatctc 419
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aaa-ttaacactctactttagcatagccattttctcctgcaagggcaatctaagcatctc 618
Query: 420 atactgacaatcccccttgtattgttactgtttatcaagctataaacatagaatatgtat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 atactgacaatcccccttgtattgttactgtttatcaagctataaacatagaatatgtat 678
Query: 480 ttgttataataatttttcagaatagtgtctgatgtggcaaggaagaagcgaacagtcaga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ttgttataataatttttcagaatagtgtctgatgtggcaaggaagaagcgaacagtcaga 738
Query: 540 ctgatgaacttaatctggttcatcctcggtctcaaacgacagcgacagcccagctcagag 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ctgatgaacttaatctggttcatcctcggtctcaaacgacagcgacagcccagctcagag 798
Query: 600 actgagaaaaataataataaaaacaaccaaacatcaacactgcatcgtccacatta 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 actgagaaaaataataataaaaacaaccaaacatcaacactgcatcgtccacatta 854
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1056
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1046
Effective search space: 674670
Effective search space used: 674670
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
