Query= MSMg01no158_f06.b1 MSMg01no158_f06.b1 CHROMAT_FILE:
MSMg01no158_f06.b1 PHD_FILE: MSMg01no158_f06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:50 2005
(157 letters)
>mm_chr11_45689710_45690266
Length = 557
Score = 296 bits (153), Expect = 4e-85
Identities = 153/153 (100%)
Strand = Plus / Plus
Query: 5 gaattctgctattctgggtgttggttagttttggtggtggggattgaacccaggaccttg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgctattctgggtgttggttagttttggtggtggggattgaacccaggaccttg 264
Query: 65 ttctgtaccaccaaaccacacttccagcctctgctaattattgttttttttttatttgag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttctgtaccaccaaaccacacttccagcctctgctaattattgttttttttttatttgag 324
Query: 125 tttaacttttgattatgtgtatgcatatctgtg 157
|||||||||||||||||||||||||||||||||
Sbjct: 325 tttaacttttgattatgtgtatgcatatctgtg 357
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 157
Length of database: 557
Length adjustment: 8
Effective length of query: 149
Effective length of database: 549
Effective search space: 81801
Effective search space used: 81801
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no158_f06.g1 MSMg01no158_f06.g1 CHROMAT_FILE:
MSMg01no158_f06.g1 PHD_FILE: MSMg01no158_f06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:50 2005
(564 letters)
>mm_chr11_45852471_45853437
Length = 967
Score = 1007 bits (521), Expect = 0.0
Identities = 555/567 (97%), Gaps = 3/567 (0%)
Strand = Plus / Minus
Query: 1 caggctcagatcacctaagacgtactactgaaactgtctgtttctgcagacgagatatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 caggctcagatcacctaagacgtactactgaaactgtctgtttctgcagacgagatatat 708
Query: 61 ttcattttattgctgtgtccaccaaggtccagaaagaggaaattaactccccttccccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 707 ttcattttattgctgtgtccaccaaggtccagaaagaggaaattaactcccctcccccac 648
Query: 121 cccccggggtcatggacaaaccctgaaacggaagccaaattggaagtccaaagtaatgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 cccccggggtcatggacaaaccctgaaacggaagccaaattggaagtccaaagtaatgag 588
Query: 181 tctgtaaggcagttgctactgaggccgccagtgagatgagtctgagcataccaatgtgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 tctgtaaggcagttgctactgaggccgccagtgagatgagtctgagcataccaatgtgga 528
Query: 241 gactcccgattgttcctgagcccagccaactctgcttcatcaggttgaagcagaggaagt 300
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 527 gactcccgattgttactgagcccagccaactctgcttcatcaggctgaagcagaggaagt 468
Query: 301 agataaaaccggaagactgtgggggtgggatgcggtaccacgcgttctttacacaaatct 360
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 467 agatgaaaccggaagactgtgggggtgggatgcggtagcacgcgttctttacacaaatct 408
Query: 361 ggaaaactgtagaggggaacctgttttaggataatgatgg-gggaagggggacatagact 419
||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 407 ggaaaactgtagaggagaacctgttttaggataatgatcgtgggaagggggacatagacg 348
Query: 420 aact--gcgcatttatcaagcttccatctacccccacataagctgcaaagggcaaaggtg 477
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 aactctgcgcatttatcaagcttccatctacccccacataagctgcaaagggcaaaggtg 288
Query: 478 tgtgcacacgcacgcagggaaagccccactcacgtgggtcttgccaattaaaaacagcag 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 287 tgtgcacacgcacgcagggaaagccccactcacgtgggtcttgccaattaaaaacggcag 228
Query: 538 ttaaggtccaaggaagcccttgattcc 564
|||||||||||||||||||||||||||
Sbjct: 227 ttaaggtccaaggaagcccttgattcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 967
Length adjustment: 10
Effective length of query: 554
Effective length of database: 957
Effective search space: 530178
Effective search space used: 530178
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
