Query= MSMg01no158_k13.b1 MSMg01no158_k13.b1 CHROMAT_FILE:
MSMg01no158_k13.b1 PHD_FILE: MSMg01no158_k13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:13 2005
(372 letters)
>mm_chr11_84550045_84550815
Length = 771
Score = 652 bits (337), Expect = 0.0
Identities = 361/369 (97%), Gaps = 1/369 (0%)
Strand = Plus / Plus
Query: 4 ggaattccttctggattccagatgttgagctgaagccagaatgggaacgcaagctgtttt 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccttctggatttcagatgttgagctgaagccagaatgggaacgcaagctgtttt 263
Query: 64 ctaggtccttttctaccacgcccaacttgtcccctcatgtgttgctctcaatgcaggggt 123
|||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctaggtccttccctaaca-gcccaacttgtcccctcatgtgttgctctcaatgcaggggt 322
Query: 124 cctcagattccatgttgattgatactccacgaacttctgcgtggcctcccactcagcccg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cctcagattccatgttgattgatactccacgaacttctgcgtggcctcccactcagcccg 382
Query: 184 tcagtgctggggaaatgttacagaattttcctgctctattttttaagttgagtcacagtc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tcagtgctggggaaatgttacagaattttcctgctctattttttaagttgagtcacagtc 442
Query: 244 tcagaactggcacccatgtatcaaagctcccacaatgcttagcacgggcagtcagcctcc 303
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 443 tcagaactggcacccatgtatcaaagctcccacaatgcagagcacgggcagtcagcctcc 502
Query: 304 ttttactttgtcaacaggataggcctcacctcttagaagcccacttccatatagcgtgtg 363
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ttttactttgtcaacaggagaggcctcacctcttagaagcccacttccatatagcgtgtg 562
Query: 364 catacataa 372
|||||||||
Sbjct: 563 catacataa 571
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 771
Length adjustment: 9
Effective length of query: 363
Effective length of database: 762
Effective search space: 276606
Effective search space used: 276606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no158_k13.g1 MSMg01no158_k13.g1 CHROMAT_FILE:
MSMg01no158_k13.g1 PHD_FILE: MSMg01no158_k13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:13 2005
(290 letters)
>mm_chr11_84651144_84651833
Length = 690
Score = 559 bits (289), Expect = e-164
Identities = 289/289 (100%)
Strand = Plus / Minus
Query: 1 tgtgagtttgaggtcagcctcctcatacacccaattctagagcatctaggaggcacgtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tgtgagtttgaggtcagcctcctcatacacccaattctagagcatctaggaggcacgtag 557
Query: 61 aaaaaccctttctcagaaaattgaagcaatcctcctgtctcaaatgctgggattactgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 aaaaaccctttctcagaaaattgaagcaatcctcctgtctcaaatgctgggattactgac 497
Query: 121 atgagcctctggataggctcagtgatttttcatatggatactctaaaatttttaacctag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 atgagcctctggataggctcagtgatttttcatatggatactctaaaatttttaacctag 437
Query: 181 aactgacagtaactagtaattagaagttaaaatatagccattatgtaagtaaattttttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 aactgacagtaactagtaattagaagttaaaatatagccattatgtaagtaaattttttt 377
Query: 241 ttattatttcttaatgtccatcctcaaaggaaacagacttcattgaaaa 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ttattatttcttaatgtccatcctcaaaggaaacagacttcattgaaaa 328
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
