Query= MSMg01no158_l17.b1 MSMg01no158_l17.b1 CHROMAT_FILE:
MSMg01no158_l17.b1 PHD_FILE: MSMg01no158_l17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:18 2005
(320 letters)
>mm_chr11_36882238_36882957
Length = 720
Score = 592 bits (306), Expect = e-173
Identities = 312/314 (99%)
Strand = Plus / Plus
Query: 5 gaattcacagctctccaaggatgaagggggcccaggggccacttgtgatatacacctgaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacagctctccaaggatgaagggggcccaggggccacttgtgatatacacctgaa 264
Query: 65 tattatgtttccagcactagctcaatctcattaggcaatatgcaaatttcttttaagatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tattatgtttccagcactagctcaatctcattaggcaatatgcaaatttcttttaagatt 324
Query: 125 tttcataaaattatatgaaagaaaaatcaatagataacaatttagagttatatatttcca 184
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 325 tttcataaaattatatgaaagaaaaatcaatagataacaatttagagtcatatatttcca 384
Query: 185 gatataacattcaccatattcttgagtgaaaatgttagttgaagaggaagcttatatcat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gatataacattcaccatattcttgagtgaaaatgttagttgaagaggaagcttatatcat 444
Query: 245 attattgtggggaagtggatatagaaatgaataggaaaggaacacagaaattcatgatct 304
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 attattgtggggaaatggatatagaaatgaataggaaaggaacacagaaattcatgatct 504
Query: 305 aatattgaagagga 318
||||||||||||||
Sbjct: 505 aatattgaagagga 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no158_l17.g1 MSMg01no158_l17.g1 CHROMAT_FILE:
MSMg01no158_l17.g1 PHD_FILE: MSMg01no158_l17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:18 2005
(286 letters)
>mm_chr11_37024699_37025384
Length = 686
Score = 491 bits (254), Expect = e-143
Identities = 281/296 (94%), Gaps = 11/296 (3%)
Strand = Plus / Minus
Query: 1 aatgaataaataaatcaattctaaaggtcaacaaaatgtcggcaaagcaagtcattaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 aatgaataaataaatcaattctaaaggtcaacaaaatgtcggcaaagcaagtcattaagg 574
Query: 61 aaaaaaataaatcaaggggta----------tttttttaacacaaccaagggcctaataa 110
|||| ||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 573 -aaaatataaatcaaggggtattgttttttttttttttaacacaaccaagggcctgataa 515
Query: 111 ggatgttttaataattattattattttagaaatcagagtctctttattaccttactgtcc 170
|||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 514 ggatgttttaataattattattcttttagaaatcagaatctctttattaccttactgtcc 455
Query: 171 ccaaggcaatgcagcaatacaagatggggactacagagtcttccttcttctctgtcctcc 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ccaaggcaatgcagcaatacaagatggggactacagagtcttccttcttctctgtcctcc 395
Query: 231 agtattccttccagccatgtacaggagattcctggaatgctcagagtggcaccttg 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 agtattccttccagccatgtacaggagattcctggaatgctcagagtggcaccttg 339
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
