Query= MSMg01no159_l15.b1 MSMg01no159_l15.b1 CHROMAT_FILE:
MSMg01no159_l15.b1 PHD_FILE: MSMg01no159_l15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:30 2005
(281 letters)
>mm_chr11_49980051_49980731
Length = 681
Score = 507 bits (262), Expect = e-148
Identities = 277/282 (98%), Gaps = 1/282 (0%)
Strand = Plus / Minus
Query: 1 gcgagcagggttgatcagagctagcagaggt-ctaaaaattcaattctcaacaaccacat 59
|||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 572 gcgagcagggttgaccggagctagcagaggtcctaaaaattcaattctcaacaaccacat 513
Query: 60 gaaggctcacaaccatctgttcagctacagtgtacccatatacataaaaaaggtcaaact 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 gaaggctcacaaccatctgttcagctacagtgtacccatatacataaaaaaggtcaaact 453
Query: 120 taagggagtcccttctctctgagcctgtcacaccagcaggggagtttttgtgtaggactc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 taagggagtcccttctctctgagcctgtcacaccagcaggggagtttttgtgtaggactc 393
Query: 180 tgtgttcagcctaccatcttttgtttgttctttacattacttaagaagttatttgtgtga 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 392 tgtgttcagcctaccatcttttgtttgttctttacattacttaagaagttatttctgtga 333
Query: 240 atacacatgccaccacagcacatggagctcagaggtcaactg 281
|||||||||||| |||||||||||||||||||||||||||||
Sbjct: 332 atacacatgccagcacagcacatggagctcagaggtcaactg 291
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no159_l15.g1 MSMg01no159_l15.g1 CHROMAT_FILE:
MSMg01no159_l15.g1 PHD_FILE: MSMg01no159_l15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:30 2005
(290 letters)
>mm_chr11_49844764_49845457
Length = 694
Score = 542 bits (280), Expect = e-158
Identities = 289/294 (98%), Gaps = 4/294 (1%)
Strand = Plus / Plus
Query: 1 aaggcctacctggtctacattgcaagttccagaccagccagagattcagaaagagaggtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggcctacctggtctacattgcaagttccagaccagccagagattcagaaagagaggtc 260
Query: 61 ggccttgtcttgtccccattaaaggggatgacttgaagtcagtcatgagaa----cttcc 116
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 ggccttgtcttgtccccattaaaggggatgacttgaagtcagtcatgagaaagaacttcc 320
Query: 117 acttatggctgtagtaggttcactggcactggttccctcccaatcttaactaatcagaaa 176
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 acttatggctgtagtaggttcactggtactggttccctcccaatcttaactaatcagaaa 380
Query: 177 accagacagcctatgagtagcagctttagataaggtcagttggcagcatgggatggggat 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accagacagcctatgagtagcagctttagataaggtcagttggcagcatgggatggggat 440
Query: 237 ccctgagagaagagccccaccattgcctcctactgtctgggaatttataggctg 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccctgagagaagagccccaccattgcctcctactgtctgggaatttataggctg 494
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 694
Length adjustment: 9
Effective length of query: 281
Effective length of database: 685
Effective search space: 192485
Effective search space used: 192485
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
