Query= MSMg01no161_d24.b1 MSMg01no161_d24.b1 CHROMAT_FILE:
MSMg01no161_d24.b1 PHD_FILE: MSMg01no161_d24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:38 2005
(422 letters)
>mm_chr11_60807154_60807975
Length = 822
Score = 690 bits (357), Expect = 0.0
Identities = 393/405 (97%)
Strand = Plus / Plus
Query: 18 gaattcttttctgtggagcaggcttccagtccaaccagaaagtgcgtagttaggcctata 77
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 218 gaattcttttctgtggagcaggcttccagtccaaccagaaagtgagtagttaggcctata 277
Query: 78 actaacaaaaccattagcgtgccattattgtatgggtgggacctgtttcataagcataaa 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 actaacaaaaccattagcgtgccattattgtatgggtgggacctgtttcataagcataaa 337
Query: 138 tgttcccagccacctgggttggtgacacctttactttgtctaagcgcctgcccacactag 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tgttcccagccacctgggttggtgacacctttactttgtctaagcgcctgcccacactag 397
Query: 198 gagctgctctactacatctgctctctgaacagctcctctgagggaaaggccattactatc 257
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 398 gagctgctctactacatctgctttctgaacagctcctctgagggaaaggccattaccatc 457
Query: 258 cccagggcttctgtgggctgacggaagggaggcaaggcacaggcctcaaccacgcaacgt 317
||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 458 cccagggctcctgtgggctgacagaagggaggcaaggcacagtcctcaaccacgcaacgg 517
Query: 318 gtgatttcagccatggcccttacgtgcaagtgctggcaggttggtcctgtcacttattcc 377
||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 518 gtgatgtcagccatggcccttacgtgcaagtgctggcaggttggtcctgtcacagagtcc 577
Query: 378 aactctggataaatccactgacaagttttctcccctagcctacat 422
|||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 578 aactctggataaatccactgacgagttttctcccctagcctacat 622
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space: 335769
Effective search space used: 335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_d24.g1 MSMg01no161_d24.g1 CHROMAT_FILE:
MSMg01no161_d24.g1 PHD_FILE: MSMg01no161_d24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:38 2005
(381 letters)
>mm_chr11_60926576_60927355
Length = 780
Score = 679 bits (351), Expect = 0.0
Identities = 372/379 (98%), Gaps = 1/379 (0%)
Strand = Plus / Minus
Query: 1 ctgctgtctcacatttgctgaagtcagatttggggtcaaggcaggacctggcaggtacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 ctgctgtctcacatttgctgaagtcagatttggggtcaaggcaggacctggcaggtacca 519
Query: 61 tcaggatggggagctgccgtggttgctgaggacatgaggcatggacctctatcagagcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 tcaggatggggagctgccgtggttgctgaggacatgaggcatggacctctatcagagcct 459
Query: 121 tggtcctgggcaggtcatatgaccctgctcccttcctgccagtatccttttggagcttgt 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 458 tggtcctgggcaggtcatatggccctgctcccttcctgccagtatccttttggagcttgt 399
Query: 181 ttccccttctatagaagtgacccatggtggcctctgctttcctagaggacacaccgtgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ttccccttctatagaagtgacccatggtggcctctgctttcctagaggacacaccgtgaa 339
Query: 241 gactagtgcccacccagtgtctggcacaggcagactccaggtcttgtggcattccttctg 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 338 gactagtgcccacccagtgtctggcacaggcagactccaggtcttgtggcattcctcctg 279
Query: 301 cttccctcccactgagctgtctaaagcatttctggatggagggaaagcaatggcagaata 360
||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 278 ctttcctcc-actgagctgtctaaagcagggctggatggagggaaagcaatggcagaata 220
Query: 361 gagcctaagaccccacttt 379
|||||||||||||||||||
Sbjct: 219 gagcctaagaccccacttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 780
Length adjustment: 9
Effective length of query: 372
Effective length of database: 771
Effective search space: 286812
Effective search space used: 286812
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
