Query= MSMg01no161_e11.b1 MSMg01no161_e11.b1 CHROMAT_FILE:
MSMg01no161_e11.b1 PHD_FILE: MSMg01no161_e11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:42 2005
(372 letters)
>mm_chr11_116553752_116554520
Length = 769
Score = 629 bits (325), Expect = 0.0
Identities = 348/357 (97%), Gaps = 5/357 (1%)
Strand = Plus / Plus
Query: 17 gaattctctgtgaatagatggctacg-tcccccctaagatgcagtgagagcccccttgga 75
|||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 217 gaattctctgtgaatagatggcta-gatcccccctaagatgcagtgagagcccccttgga 275
Query: 76 cactgcaggcccagcctctctcctacccgactgtcacttggccctgatcacaaggatgct 135
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 276 cactgcaggcccagcctctctcctacctgactgtcacttggccctgatcacaaggatgct 335
Query: 136 catcttctggccatactcagaaagccacctaccttgctggactacctaccctcctcctac 195
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 336 catcttctggccatactcagaaagccacttaccttgctggactacctaccctcctcctac 395
Query: 196 agccaggttgaaccctaacctgccccttcctccctcacacccaggttttactgtactgta 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 agccaggttgaaccctaacctgccccttcctccctcacacccaggttttactgtactgta 455
Query: 256 gcaaaccccagcaaaaacaaggaaaaggacgggctttccgttcctagcagatgttgtcag 315
|||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 456 gcaaaccccagcaaaaacaaggaaaaggacaggctttcagttcctagcagatgttgtcag 515
Query: 316 gggttgttgtcgtcttagttttagtactgggtaccaaaccccaagacttcatccatg 372
||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gggttgttgtc---ttagttttagtactgggtaccaaaccccaagacttcatccatg 569
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 769
Length adjustment: 9
Effective length of query: 363
Effective length of database: 760
Effective search space: 275880
Effective search space used: 275880
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_e11.g1 MSMg01no161_e11.g1 CHROMAT_FILE:
MSMg01no161_e11.g1 PHD_FILE: MSMg01no161_e11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:42 2005
(117 letters)
>mm_chr11_116701090_116701606
Length = 517
Score = 219 bits (113), Expect = 6e-62
Identities = 116/117 (99%)
Strand = Plus / Minus
Query: 1 gttatttttaaacataaaagctagcactagccaaaacaacaacaacaacaaaagcctttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gttatttttaaacataaaagctagcactagccaaaacaacaacaacaacaaaagcctttg 258
Query: 61 ttgaggtttttattttccctggaagcattcatttgaacttagaaccttcagttcatg 117
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 257 ttgaggtttttattttccctggaagcattcatttgaacttagtaccttcagttcatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 117
Length of database: 517
Length adjustment: 8
Effective length of query: 109
Effective length of database: 509
Effective search space: 55481
Effective search space used: 55481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
