Query= MSMg01no161_f22.b1 MSMg01no161_f22.b1 CHROMAT_FILE:
MSMg01no161_f22.b1 PHD_FILE: MSMg01no161_f22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:54 2005
(411 letters)
>mm_chr11_56815651_56816463
Length = 813
Score = 716 bits (370), Expect = 0.0
Identities = 398/408 (97%), Gaps = 2/408 (0%)
Strand = Plus / Plus
Query: 4 ggaattcttactgctaaagtcagaactgttcctcatagctaacagttttatgtggtctcc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttactgctaaagtcagaactgttcctcatagctaacagttttatgtggtctcc 263
Query: 64 agtgtgaaggtagctgttttaccagtctgtggaacctttaagagatagggcattgtgggt 123
||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 264 agtgtgaaggtagctgttttaggaatctgtggaacctttaagagatagggcattgtgggt 323
Query: 124 aggggaagcaggtggggtacagagcaggcaactaggggaggtccacctatgaaggttata 183
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 324 aggggaagcaggtggggtacagagcaggcaactaggggaggtccacctgtgaaggttata 383
Query: 184 gaccagccctaaggtctggccttctcctctgcttcttggcctcacttacatgtaagcaga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gaccagccctaaggtctggccttctcctctgcttcttggcctcacttacatgtaagcaga 443
Query: 244 ttctcagcagcctttcttttgctttt--ttgcttgtttgtttgcttgctttttgagacaa 301
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 444 ttctcagcagcctttcttttgcttttgtttgcttgtttgtttgcttgctttttgagacaa 503
Query: 302 tctcttacatgtattggtctagcctcgaactctccatgtaaccaagctgggtttgatttc 361
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 504 tctcttacgtgtattggtctagcctcgaactctccatgtaaccaagctgggtttgaactc 563
Query: 362 ttgatcttcctgcttcctttccagttgtaagtgcagacgcctcatttt 409
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctgatcttcctgcttcctttccagttgtaagtgcagacgcctcatttt 611
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 813
Length adjustment: 9
Effective length of query: 402
Effective length of database: 804
Effective search space: 323208
Effective search space used: 323208
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_f22.g1 MSMg01no161_f22.g1 CHROMAT_FILE:
MSMg01no161_f22.g1 PHD_FILE: MSMg01no161_f22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:54 2005
(388 letters)
>mm_chr11_56969425_56970212
Length = 788
Score = 702 bits (363), Expect = 0.0
Identities = 372/375 (99%)
Strand = Plus / Minus
Query: 1 atgcatctcttagtgcctgcccctggttctacacaggagagattctgagcactgggccta 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 575 atgcatctcttagtgcctgcccctggttctacacaggagagattctgagcactggggtta 516
Query: 61 ggggtggagaaactgggtttgtctattgggcacattaattagtatctgaagccttggctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ggggtggagaaactgggtttgtctattgggcacattaattagtatctgaagccttggctc 456
Query: 121 tctcctccgtgtatgggaattacagtcacgttctcttacagtgctgctgagagtcacacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tctcctccgtgtatgggaattacagtcacgttctcttacagtgctgctgagagtcacacc 396
Query: 181 cagttcttagcgcaggcccttgctcagctaagggactttctgtgtgtgtggctgcagcgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 cagttcttagcgcaggcccttgctcagctaagggactttctgtgtgtgtggctgcagcgg 336
Query: 241 ctcctgtatctttgtcattattttgcagaggacagcatctggttgctcagaaagatatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ctcctgtatctttgtcattattttgcagaggacagcatctggttgctcagaaagatatca 276
Query: 301 gcaaagctgacaattttactcctgtagtgattagaaaaatcacaggatcacatgtagctc 360
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 275 gcaaagctgacaattttactcctgtagtgagtagaaaaatcacaggatcacatgtagctc 216
Query: 361 ccggcagtgagctca 375
|||||||||||||||
Sbjct: 215 ccggcagtgagctca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 788
Length adjustment: 9
Effective length of query: 379
Effective length of database: 779
Effective search space: 295241
Effective search space used: 295241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
