Query= MSMg01no161_h20.b1 MSMg01no161_h20.b1 CHROMAT_FILE:
MSMg01no161_h20.b1 PHD_FILE: MSMg01no161_h20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:28:09 2005
(355 letters)
>mm_chr11_54614121_54614874
Length = 754
Score = 557 bits (288), Expect = e-163
Identities = 312/322 (96%), Gaps = 5/322 (1%)
Strand = Plus / Minus
Query: 38 tgcaggtatttgtgaaggccagaagagaatatcagattccctggagctggacttacagat 97
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct: 754 tgcaggtatttgtgaaggccagaagagaatatcagattccctggagctggagttacaggt 695
Query: 98 ggttgtgaggtgctaatgtgggtgttgtgaactgaacttgggtcctctggaagaacagtg 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 ggttgtgaggtgctaatgtgggtgttgtgaactgaacttgggtcctctggaagaacagtg 635
Query: 158 tgcacccttaaccactgggccatctctccagacatatcctcccttcctctctt----ctt 213
|||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 634 tgcacctttaactactgggccatctctccagacatatcctcccttcctctcttcttcctt 575
Query: 214 ccttcgtttctttcttacttttgtatgcatgaacgtgtgtgttggtgtgtactcatgcca 273
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 574 ccttcgtttctttcttacttttgtatgcatgaatgtgtgtgttggtgtgtactcatgcca 515
Query: 274 tagtgcatgcacggatgtcagacaaccacttgtggaagatgaacttgtctttctaccttg 333
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 514 tagtgcatgcacggatgtcagacaaccac-tgtggaagatgaacttgtctttctaccttg 456
Query: 334 caggtcctgggtgtagctgagg 355
||||||||||||||||||||||
Sbjct: 455 caggtcctgggtgtagctgagg 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 355
Length of database: 754
Length adjustment: 9
Effective length of query: 346
Effective length of database: 745
Effective search space: 257770
Effective search space used: 257770
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_h20.g1 MSMg01no161_h20.g1 CHROMAT_FILE:
MSMg01no161_h20.g1 PHD_FILE: MSMg01no161_h20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:28:09 2005
(382 letters)
>mm_chr11_54458426_54459206
Length = 781
Score = 721 bits (373), Expect = 0.0
Identities = 379/381 (99%), Gaps = 1/381 (0%)
Strand = Plus / Plus
Query: 1 actgtgtagccatagctggtttcaaactctttaaagggctgaactcttgcttctacttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgtgtagccatagctggtttcaaactctttaaagggctgaactcttgcttctacttct 260
Query: 61 tcccaagagctagaagcacaggtatgcgtcacccacagcaagtaaatgatttttcttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcccaagagctagaagcacaggtatgcgtcacccacagcaagtaaatgatttttcttctt 320
Query: 121 tcatttttttttttcattttgcaaagactgcaaataggaaatggaataagattataaaca 180
||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 tcatttttttttt-cattttgcaaagactgcaaataggaaatggaataagactataaaca 379
Query: 181 cccaaagtcttctcccagtgatgaacttcctctagcaaggctacactgtccaagcttccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cccaaagtcttctcccagtgatgaacttcctctagcaaggctacactgtccaagcttccc 439
Query: 241 tacatagcaccaccaacttggaaacaagtgttcaaatatttgaatctataggggacatac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tacatagcaccaccaacttggaaacaagtgttcaaatatttgaatctataggggacatac 499
Query: 301 tcattcaaaccactacagagattcaccctttcagacaaactcctgagaattatttataag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tcattcaaaccactacagagattcaccctttcagacaaactcctgagaattatttataag 559
Query: 361 ggaaaaacaacactgtgatat 381
|||||||||||||||||||||
Sbjct: 560 ggaaaaacaacactgtgatat 580
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 781
Length adjustment: 9
Effective length of query: 373
Effective length of database: 772
Effective search space: 287956
Effective search space used: 287956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
