Query= MSMg01no163_b05.b1 MSMg01no163_b05.b1 CHROMAT_FILE:
MSMg01no163_b05.b1 PHD_FILE: MSMg01no163_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:30:35 2005
(703 letters)
>mm_chr11_25725170_25726271
Length = 1102
Score = 1323 bits (684), Expect = 0.0
Identities = 695/699 (99%), Gaps = 1/699 (0%)
Strand = Plus / Plus
Query: 5 gaattcaccaagccatatattaagtacaagtccagaggctaattacaattctggaacttt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaccaagccatatattaagtacaagtccagaggctaattacaattctggaacttt 264
Query: 65 ctcgttttaggctgctatgacacactatgagactcttggcagaggctctaggtatttctg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctcgttttaggctgctatgacacactatgagactcttggcagaggctctaggtatttctg 324
Query: 125 gatatcaactgttctcaatttatctcatttcttcagtatccaatctcatctgcacagttc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gatatcaactgttctcaatttatctcatttcttcagtatccaatctcatctgcacagttc 384
Query: 185 atgcaaatcactattctgttggatttctagactcttgggctgtagagaccattagaggct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atgcaaatcactattctgttggatttctagactcttgggctgtagagaccattagaggct 444
Query: 245 tgtagtctagaccactagctgacacattcgtcccttaaggtacctagcagatgtgtgggg 304
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 445 tgtagtctagaccactagctgacacattcttcccttaaggtacctagcagatgtgtgggg 504
Query: 305 actttcagctagggtaccaagcctttcggggaacttgcagagttttaacacccacccagc 364
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 505 actttcagctagggtaccaagt-tttcggggaacttgcagagttttaacacccacccagc 563
Query: 365 ctcactgtacagccttgacttttaaaagactgttccaagtctgtcttcttctgttactca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctcactgtacagccttgacttttaaaagactgttccaagtctgtcttcttctgttactca 623
Query: 425 caacagtttagtgcatctgcatcctctgaaaagatgtttataaaatggcccaaagggtcc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 caacagtttagtgcatctgcatcctctgaaaagatgtttataaaatggcccaaagggtcc 683
Query: 485 caatctactctgaggaggaccagcagtcacatcagaaagattgcactacctaactgccca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 caatctactctgaggaggaccagcagtcacatcagaaagattgcactacctaactgccca 743
Query: 545 tagttcaaaccagtgttgtttcttactgggctttgggaattacacttgccttttatgagc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tagttcaaaccagtgttgtttcttactgggctttgggaattacacttgccttttatgagc 803
Query: 605 tgggacactaccatactgcttcatttttgtcatgtacaaaagtcgaaggggtgctgagaa 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tgggacactaccatactgcttcatttttgtcatgtacaaaagtcgaaggggtgctgagaa 863
Query: 665 tgcaaatctatatttacctagnttggactcctcttcatt 703
||||||||||||||||||||| |||||||||||||||||
Sbjct: 864 tgcaaatctatatttacctagtttggactcctcttcatt 902
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 703
Length of database: 1102
Length adjustment: 10
Effective length of query: 693
Effective length of database: 1092
Effective search space: 756756
Effective search space used: 756756
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no163_b05.g1 MSMg01no163_b05.g1 CHROMAT_FILE:
MSMg01no163_b05.g1 PHD_FILE: MSMg01no163_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:30:35 2005
(293 letters)
>mm_chr11_25847966_25848658
Length = 693
Score = 559 bits (289), Expect = e-164
Identities = 292/293 (99%)
Strand = Plus / Minus
Query: 1 tgggtaatagaactgactctccatgttcttattcatttgcctaactttgtacatttgtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tgggtaatagaactgactctccatgttcttattcatttgcctaactttgtacatttgtct 434
Query: 61 tcttttggaaaacttcttgggtttaggaaaattaggcagcatgcaccccttggtggtcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tcttttggaaaacttcttgggtttaggaaaattaggcagcatgcaccccttggtggtcag 374
Query: 121 tgacagtctcctccccatcatgtgagggtagcattgtgatttgctgggtgcttttgcact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tgacagtctcctccccatcatgtgagggtagcattgtgatttgctgggtgcttttgcact 314
Query: 181 tagtagccccattggttcattactttgtgggagttaaaataactgaagcagagtaagcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tagtagccccattggttcattactttgtgggagttaaaataactgaagcagagtaagcct 254
Query: 241 atatatctgtagtcagagaagtcccaggatttctgacattcacttctggtttt 293
|||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 atatatctgtagacagagaagtcccaggatttctgacattcacttctggtttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
