Query= MSMg01no163_l17.b1 MSMg01no163_l17.b1 CHROMAT_FILE:
MSMg01no163_l17.b1 PHD_FILE: MSMg01no163_l17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:23 2005
(311 letters)
>mm_chr11_88580879_88581589
Length = 711
Score = 563 bits (291), Expect = e-165
Identities = 303/307 (98%)
Strand = Plus / Plus
Query: 4 ggaattcactcatcaccaaaactatgccgtgtccattgtgggtttggagacatttggaaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcactcatcaccaaaactatgccgtgtccattgtgggtttggagacatttggaaa 263
Query: 64 aatctcaacacacccaaagcttttgagtggtcagactgtcaatctttctgtcccctaaac 123
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 264 aatctcaacacagccaaagcttttgagtggtcagactgtcaatctctctgtcccctaaac 323
Query: 124 tggggtagtgcctctctgatagcatggatgggcggagcatttgtagtgaacaatgtaaca 183
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tggggtagtgcctctctgacagcatggatgggcggagcatttgtagtgaacaatgtaaca 383
Query: 184 atgtcaaagtccctttttaaaattgtgtacttacatggactgtgtttattatgaattgtg 243
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 384 atgtcaaagtccctttttaaaattgtgtacttacatggactgtgtttattataaattgtg 443
Query: 244 aatatgatttttagaaggcacttcataagacttcagaccacaaaccctgctgtttcccaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aatatgatttttagaaggcacttcataagacttcagaccacaaaccctgctgtttcccaa 503
Query: 304 cactcca 310
|||||||
Sbjct: 504 cactcca 510
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 711
Length adjustment: 9
Effective length of query: 302
Effective length of database: 702
Effective search space: 212004
Effective search space used: 212004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no163_l17.g1 MSMg01no163_l17.g1 CHROMAT_FILE:
MSMg01no163_l17.g1 PHD_FILE: MSMg01no163_l17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:23 2005
(242 letters)
>mm_chr11_88692717_88693359
Length = 643
Score = 462 bits (239), Expect = e-135
Identities = 242/243 (99%), Gaps = 1/243 (0%)
Strand = Plus / Minus
Query: 1 tctc-tttttttccaggtggtgttgataaaccggtcgctggtggagcgaggccttgcaca 59
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tctcttttttttccaggtggtgttgataaaccggtcgctggtggagcgaggccttgcaca 384
Query: 60 gtgggtagacagctactatgccagcctctgaccttggctcctgagttgcttcggtcttct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gtgggtagacagctactatgccagcctctgaccttggctcctgagttgcttcggtcttct 324
Query: 120 ttgcactgttgagagtgggtttggcacccaggacagagttttaagagcagagtaacaaac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttgcactgttgagagtgggtttggcacccaggacagagttttaagagcagagtaacaaac 264
Query: 180 actgttctcactgagtcttctttccccattctgtagtcctgtggaggaggagggtcctcc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 actgttctcactgagtcttctttccccattctgtagtcctgtggaggaggagggtcctcc 204
Query: 240 cag 242
|||
Sbjct: 203 cag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 643
Length adjustment: 9
Effective length of query: 233
Effective length of database: 634
Effective search space: 147722
Effective search space used: 147722
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
