Query= MSMg01no165_h13.b1 MSMg01no165_h13.b1 CHROMAT_FILE:
MSMg01no165_h13.b1 PHD_FILE: MSMg01no165_h13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:33:38 2005
(636 letters)
>mm_chr11_53438289_53439324
Length = 1036
Score = 1104 bits (571), Expect = 0.0
Identities = 616/633 (97%), Gaps = 6/633 (0%)
Strand = Plus / Minus
Query: 5 gaattcagggttaaaccaactgtggctttaagttccatggtgtccccaaattgcagaact 64
|||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 gaattcagagttaaatcaactctggctttaagttccatggtgtccccaaattgcagaact 943
Query: 65 tgttgcttgggctaagtctcaggtgccactctgaggcagagctccatccatctacccacc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942 tgttgcttgggctaagtctcaggtgccactctgaggcagagctccatccatctacccacc 883
Query: 125 cacccatccatctcacccacccatcctcccatccatccatccatccatcctcagggattc 184
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 882 cacccatccatctcacccacccatcctc----ccatccatccatccatcctcagggattc 827
Query: 185 actgcagccttaccaggtaccacggatctggttcctgagcacagcaaggttaggttacat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 actgcagccttaccaggtaccacggatctggttcctgagcacagcaaggttaggttacat 767
Query: 245 ccagtgagacagtgagacaacatagagcaacagcacagaggtgccaggcacctcggaagc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 ccagtgagacagtgagacaacatagagcaacagcacagaggtgccaggcacctcggaagc 707
Query: 305 cacagaggagaagccactggccagtagttggggcagagcacaggaagccaagtgcacctc 364
||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 706 cacagaggagaagccactggccagtggttggggcagagcacaggaagccaagtacacctc 647
Query: 365 actcgcgagatgggtgaaaacagaggtctggctggctggagagagtctgtgtgagagatg 424
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 646 actcgtgagatgggtgaaaacagaggtctggctggctggagagagtctgtgtgagagacg 587
Query: 425 ttctttgcattagcaagaccaaagcatcaaacaagaggactggagtggcccaagtcttga 484
||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 586 ttctttgcattagcaagaccaaagcatcaaacaagagtactggagtgacccaagtcttga 527
Query: 485 tcagacagacacacagcacatgaagcctaactccggcactcaggaagtataggtaggagg 544
|||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 526 tcagacagacgcacagcacatgaagcctaactccggcactcaggaggtataggtaggagg 467
Query: 545 gacaggagtttgaggactgtng-aaaatgtctaagaccttgaggccaagccgtatctgaa 603
|||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 466 gacaggagtttgaggactgt-gaaaaatgtctaagaccttgaggccaagccgtatctgaa 408
Query: 604 tcagattttagcagagccattctggcagtgagg 636
|||||||||||||||||||||||||||||||||
Sbjct: 407 tcagattttagcagagccattctggcagtgagg 375
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no165_h13.g1 MSMg01no165_h13.g1 CHROMAT_FILE:
MSMg01no165_h13.g1 PHD_FILE: MSMg01no165_h13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:33:38 2005
(338 letters)
>mm_chr11_53259311_53260048
Length = 738
Score = 603 bits (312), Expect = e-177
Identities = 330/336 (98%)
Strand = Plus / Plus
Query: 1 ttttaccttcccttagatgggatggtgctaatatccgtgtcatggggattaaatgaactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttaccttcccttagatgggatggtgctaatatccgtgtcatggggattaaatgaactt 260
Query: 61 ttacatgtaaagtactcagagcactcaggcctctaaatcccaaggacagagtcaggagga 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttacatgtaaagtactcggagcactcaggcctctaaatcccaaggacagagtcaggagga 320
Query: 121 tgtcttgcctggctgacttattaagaccttgtcttacagttattttttccttttcccttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtcttgcctggctgacttattaagaccttgtcttacagttattttttccttttcccttt 380
Query: 181 ttaactccttgtcctgtccatttaaaactatcatttattcttgtttgcacgtacgtatgg 240
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 381 ttaactccttgtcctgtccatttaaaactatcatttattcttgtttacacgtacgtctgg 440
Query: 241 gtgagacacttgcctgtatgtatactacgtgcgcgcgagtgagtattcagcctcacttcc 300
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 441 gtgagacacttgcctgtatgtatactacgtgcacgcgagtgagtattcagcctcgcttcc 500
Query: 301 gcagttatgagtatttcacaggtgctgggtcaagag 336
|| |||||||||||||||||||||||||||||||||
Sbjct: 501 gccgttatgagtatttcacaggtgctgggtcaagag 536
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
