Query= MSMg01no166_f23.b1 MSMg01no166_f23.b1 CHROMAT_FILE:
MSMg01no166_f23.b1 PHD_FILE: MSMg01no166_f23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:51 2005
(317 letters)
>mm_chr11_4584613_4585329
Length = 717
Score = 559 bits (289), Expect = e-164
Identities = 307/313 (98%), Gaps = 3/313 (0%)
Strand = Plus / Plus
Query: 4 ggaattccaaatttaagattagtagcccaagagtgttgggtgggtaaaccatttggtccc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccaaatttaagattagtagcccaagagtgttgggtgggtaaaccatttggtccc 263
Query: 64 tagacccaccctccctccaccccatgctgtcctaatgcgggtattttccaagtgcctttt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tagacccaccctccctccaccccatgctgtcctaatgcgggtattttccaagtgcctttt 323
Query: 124 ctgtgccctacagagaatgtgaccaccatagatgtttctggagaaactttttttttttta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctgtgccctacagagaatgtgaccaccatagatgtttctggagaaactttttttttttta 383
Query: 184 tcgagacagggaatctctgtgtcctgtcctggacttcgtagactaggctggcctcgaact 243
|||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 384 tcgagacaggga-t-tctgtgtcctgtcctggacttcgtagactaggctggcctc-aact 440
Query: 244 catagagatctacctgcttctgctgggattaaaggtgtgtaccaccacacctggccctga 303
|| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 441 cacagagatctacctgcttctgctgggattaaaggcgtgcaccaccacacctggccctga 500
Query: 304 ggaaacttttaaa 316
|||||||||||||
Sbjct: 501 ggaaacttttaaa 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no166_f23.g1 MSMg01no166_f23.g1 CHROMAT_FILE:
MSMg01no166_f23.g1 PHD_FILE: MSMg01no166_f23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:51 2005
(343 letters)
>mm_chr11_4701548_4702290
Length = 743
Score = 638 bits (330), Expect = 0.0
Identities = 336/338 (99%)
Strand = Plus / Minus
Query: 4 ggtgaaaggagagaactcttgttcttactgtacggcacatggtcctatgatcttcacatg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ggtgaaaggagagaactcttgttcttactgtacggcacatggtcctatgatcttcacatg 500
Query: 64 tgtgctgtggcataagcatgcattcacacaacacacacaaattagtaagtattaaataat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tgtgctgtggcataagcatgcattcacacaacacacacaaattagtaagtattaaataat 440
Query: 124 taaaagttttattagtttgtgtttgacatctgtttctttgaggttagactaatgcatttc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 taaaagttttattagtttgtgtttgacatctgtttctttgaggttagactaatgcatttc 380
Query: 184 tgtggttttgtctcttgcccaccaccaacattaattgtttaaaagaaaaaagcatttgca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tgtggttttgtctcttgcccaccaccaacattaattgtttaaaagaaaaaagcatttgca 320
Query: 244 atccttataatatggatttcttgggctaggcagtggtaacacacacttttaatctgagca 303
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 atccttagaaaatggatttcttgggctaggcagtggtaacacacacttttaatctgagca 260
Query: 304 ctcaggaggcagaggcaggcagatctctgtgagttgaa 341
||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ctcaggaggcagaggcaggcagatctctgtgagttgaa 222
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
