Query= MSMg01no166_g17.b1 MSMg01no166_g17.b1 CHROMAT_FILE:
MSMg01no166_g17.b1 PHD_FILE: MSMg01no166_g17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:55 2005
(369 letters)
>mm_chr11_92697282_92698050
Length = 769
Score = 601 bits (311), Expect = e-176
Identities = 325/331 (98%), Gaps = 3/331 (0%)
Strand = Plus / Minus
Query: 5 gaattcctcaggtgcctacatttctttgtgtgcggttgagagatcataagctttccttat 64
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 328 gaattcctcaggtgcctacatttctttgtgtggggttgagagatcataagctttccttat 269
Query: 65 tcattttagcatgtattctggaattgtctttgttcagttccccaaagccataaagcagct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tcattttagcatgtattctggaattgtctttgttcagttccccaaagccataaagcagct 209
Query: 125 aacaaaaaacaaaagacaacaatgataacaaaaacaaacaagcaagcaaacaacaacaac 184
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 208 aacaaaaaacaaaagacaacaatgacaacaaaaacaaacaagcaagcaaacaacaacaac 149
Query: 185 aacaacaaaaaaccacaccactcataagaagtggtgtttttgaatggctgattgaggttg 244
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 aacaa---aaaaccacaccactcataagaagtggtgtttttgaatggctgattgaggttg 92
Query: 245 tccaagagactctcaaatattagaggcttttactgccacactcctaccccaggtgggagg 304
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 tccaagagactcttaaatattagaggcttttactgccacactcctaccccaggtgggagg 32
Query: 305 ttatattgctgaagacatcatgcacttcaga 335
|||||||||||||||||||||||||||||||
Sbjct: 31 ttatattgctgaagacatcatgcacttcaga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 769
Length adjustment: 9
Effective length of query: 360
Effective length of database: 760
Effective search space: 273600
Effective search space used: 273600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no166_g17.g1 MSMg01no166_g17.g1 CHROMAT_FILE:
MSMg01no166_g17.g1 PHD_FILE: MSMg01no166_g17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:55 2005
(535 letters)
>mm_chr11_92527181_92528115
Length = 935
Score = 980 bits (507), Expect = 0.0
Identities = 524/531 (98%), Gaps = 3/531 (0%)
Strand = Plus / Plus
Query: 1 cattgtcctttgaaataagtaaaagcatttccattgcatcctaaagctctccattcgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 cattgtcctttgaaataagtaaaagcatttccattgcatcctaaagctctccatttgatc 260
Query: 61 actattagctggactagggaatgcaacgcagaagaaagaaatttagattgagaaggagac 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 actattagctggactagggaatgcaacacagaagaaagaaatttagattgagaaggagac 320
Query: 121 aaatcttgctaattggttctactctgtgagcaggtagctggaagcctcatctgtatgggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaatcttgctaattggttctactctgtgagcaggtagctggaagcctcatctgtatgggc 380
Query: 181 aggtaataggactgactatgggatttcaaatggatcttctaaactttaactgaaatgcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggtaataggactgactatgggatttcaaatggatcttctaaactttaactgaaatgcag 440
Query: 241 tagggtttaaagcaactgccccatttctttgattcagcattatgatctggaggtttgtca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagggtttaaagcaactgccccatttctttgattcagcattatgatctggaggtttgtca 500
Query: 301 agcactgataataatttttgatacttcagaatacatgaccactcacccacaggaatttta 360
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 501 agcactgataataatttttgatacttcagaatacatgaaaactcacccacaggaatttta 560
Query: 361 aattatgaatttagttttgttctagttagtgttactatttctatggtgaaataccatgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aattatgaatttagttttgttctagttagtgttactatttctatggtgaaataccatgac 620
Query: 421 caaagcaacttggagagaaatgggtttatttcaacttacacttccagggtaacaatttat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caaagcaacttggagagaaatgggtttatttcaacttacacttccagggtaacaatttat 680
Query: 481 cactgaggaaagtctgagcaggaactcaaatagaacaggaatttagaggca 531
|||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 681 cactgaggaaagtctgagcaggaactcaaata---caggaatttagaggca 728
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 935
Length adjustment: 10
Effective length of query: 525
Effective length of database: 925
Effective search space: 485625
Effective search space used: 485625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
