Query= MSMg01no166_h03.b1 MSMg01no166_h03.b1 CHROMAT_FILE:
MSMg01no166_h03.b1 PHD_FILE: MSMg01no166_h03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:57 2005
(373 letters)
>mm_chr11_97157529_97158301
Length = 773
Score = 368 bits (190), Expect = e-106
Identities = 193/194 (99%)
Strand = Plus / Plus
Query: 6 aattctaggacagccagggctacacagagaaactctaccttggaaaacaaaaataaataa 65
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 26 aattctaggacagccagggctacacagagcaactctaccttggaaaacaaaaataaataa 85
Query: 66 ataaaataaaataagacatgaagtgtaaaattctgaagcaggaagaagctgagggctcag 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 ataaaataaaataagacatgaagtgtaaaattctgaagcaggaagaagctgagggctcag 145
Query: 126 tcagtgtctcagcaggctcagccgaccctctaggaagcaatgaacctggataagcttcaa 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 tcagtgtctcagcaggctcagccgaccctctaggaagcaatgaacctggataagcttcaa 205
Query: 186 gattttctcaattc 199
||||||||||||||
Sbjct: 206 gattttctcaattc 219
Score = 350 bits (181), Expect = e-101
Identities = 187/189 (98%)
Strand = Plus / Plus
Query: 184 aagattttctcaattcaggcagtggactaggtctttatccacctgtgcgcattagtcttt 243
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aagattttctcaattcaagcagtggactaggtctttatccacctgtgcgcattagtcttt 443
Query: 244 ggataagagccaccatgagtgattaccagctgaggttatcactaaagtggactgacagtg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggataagagccaccatgagtgattaccagctgaggttatcactaaagtggactgacagtg 503
Query: 304 gagggctgcctgctggctgcctgcctgacagctgaggacaaggtctctcatgctgagagg 363
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 504 gagggctgcctgctggctgccttcctgacagctgaggacaaggtctctcatgctgagagg 563
Query: 364 agaaccaga 372
|||||||||
Sbjct: 564 agaaccaga 572
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no166_h03.g1 MSMg01no166_h03.g1 CHROMAT_FILE:
MSMg01no166_h03.g1 PHD_FILE: MSMg01no166_h03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:57 2005
(338 letters)
>mm_chr11_97294175_97294912
Length = 738
Score = 654 bits (338), Expect = 0.0
Identities = 338/338 (100%)
Strand = Plus / Minus
Query: 1 aaggccagcctggtctacaaagccagttccaggacagccagggctacacagagaaaccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 aaggccagcctggtctacaaagccagttccaggacagccagggctacacagagaaaccct 623
Query: 61 gcatctaaatagtttttaaaaaagaaaggaagaaataaagaaagaaagaagaaaggaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gcatctaaatagtttttaaaaaagaaaggaagaaataaagaaagaaagaagaaaggaagg 563
Query: 121 gagggaggaagaaaggaaggaagatggctgcctgggactggagaagattgactaggcact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gagggaggaagaaaggaaggaagatggctgcctgggactggagaagattgactaggcact 503
Query: 181 cacttcctgctttgatgacacagagatgccttttgagcaagatagcggtgacgggtcaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 cacttcctgctttgatgacacagagatgccttttgagcaagatagcggtgacgggtcaat 443
Query: 241 gcagaaaccactaacatcacagaactaaccgtacactcagaaatggcttccttcgaggct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gcagaaaccactaacatcacagaactaaccgtacactcagaaatggcttccttcgaggct 383
Query: 301 ggagagataggttagcagttaagaaagcacagggctct 338
||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ggagagataggttagcagttaagaaagcacagggctct 345
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
