Query= MSMg01no167_b13.b1 MSMg01no167_b13.b1 CHROMAT_FILE:
MSMg01no167_b13.b1 PHD_FILE: MSMg01no167_b13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:47 2005
(440 letters)
>mm_chr11_107442322_107443161
Length = 840
Score = 629 bits (325), Expect = 0.0
Identities = 325/325 (100%)
Strand = Plus / Minus
Query: 1 agtactgttagccaacagtgtctaatgtctacttgaaatgatcaacaccgtagagatgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 agtactgttagccaacagtgtctaatgtctacttgaaatgatcaacaccgtagagatgct 268
Query: 61 tttggacagactttataacaggggtaggaagacaactctttctagataatgtagttaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tttggacagactttataacaggggtaggaagacaactctttctagataatgtagttaaga 208
Query: 121 gtgggtacacaaacatgagaagctgagctcagatgcccaacacacatgtagaagcagggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gtgggtacacaaacatgagaagctgagctcagatgcccaacacacatgtagaagcagggc 148
Query: 181 acagcagtacaggtctgtacccccagtgctgggggacagggaaagcacagacaggagact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 acagcagtacaggtctgtacccccagtgctgggggacagggaaagcacagacaggagact 88
Query: 241 ctcaggagcctgttggccgtcagcctcaccaagcaaggagctccaggtccagtgaaatac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 ctcaggagcctgttggccgtcagcctcaccaagcaaggagctccaggtccagtgaaatac 28
Query: 301 catgtgccctaaataagaaaaatca 325
|||||||||||||||||||||||||
Sbjct: 27 catgtgccctaaataagaaaaatca 3
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no167_b13.g1 MSMg01no167_b13.g1 CHROMAT_FILE:
MSMg01no167_b13.g1 PHD_FILE: MSMg01no167_b13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:47 2005
(512 letters)
>mm_chr11_107274324_107275234
Length = 911
Score = 944 bits (488), Expect = 0.0
Identities = 506/512 (98%), Gaps = 1/512 (0%)
Strand = Plus / Plus
Query: 1 attcggacacagaggaattttttttttcttctcatctctaggcagaaaaggatccagaac 60
||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 attcggacacagaggaa-tttttttttcttctcgtctctaggcagaaaaggatccagaac 259
Query: 61 agggtgagctgtgagatgcagggaccaaagccatctagagggaaggaccacctgtggcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 agggtgagctgtgagatgcagggaccaaagccatctagagggaaggaccacctgtggcct 319
Query: 121 ccggaggagaggggggcggggcgagaaaagaaaaacaaaccagccagtcagagcgacctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ccggaggagaggggggcggggcgagaaaagaaaaacaaaccagccagtcagagcgacctg 379
Query: 181 gaggcccactggaaccgggctagcaactcaaaccttctgcaccaaatgcccgaacaatgg 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gaggccgactggaaccgggctagcaactcaaaccttctgcaccaaatgcccgaacaatgg 439
Query: 241 cccctatttatgcacagctccaaaggctccttgcatcagaaggcaccttcgagaataaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cccctatttatgcacagctccaaaggctccttgcatcagaaggcaccttcgagaataaac 499
Query: 301 cggcagctaattctcctggtagcagaaatccactctcacggcaaacaaagccctgctctg 360
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 500 cggcagctaattctcctggtagcagaaatccactctcacgggaaacaaagccctgctctg 559
Query: 361 ttactcagaagaaggattaaatccagcgggataaagggaaacagttcgttgccaggtcac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttactcagaagaaggattaaatccagcgggataaagggaaacagttcgttgccaggtcac 619
Query: 421 ctcggcaaggccgagcacggaaaaccagagtgttctcatctctcccccactttataaagt 480
||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 620 ctcggcaaggctgagcacggaaaaccagagtgttctcatctcgcccccactttataaagt 679
Query: 481 cttgggttggtgttccttaaatttaaaaaaaa 512
||||||||||||||||||||||||||||||||
Sbjct: 680 cttgggttggtgttccttaaatttaaaaaaaa 711
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 911
Length adjustment: 10
Effective length of query: 502
Effective length of database: 901
Effective search space: 452302
Effective search space used: 452302
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
