TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTGGGATGGCGTGTAAACCAGCAATCCTTCCTGAGATTGTAGGCT
CCAGCCATTGGCTGCCTGCCCCTAACCCCAGTCACTTCTACTTTGTTCTT
ACAAAGTTCTACCATTTGGGGGAAAGCTGAACTATAGCAGTCAGGTGCAT
TATGGGCCTTTCACCTCCCACCCCTCTTCCCTGCAGCTTCCTGGGCTAAA
GCACAGGATGCCTCATGGTCCATCCTGCTTTCCTACTGTGAGCCAAGGAG
GGTAAATTCTTAGGAAGCTGATGGAGGTGACCTCAGCAATCAGCCAGACC
CATATTCCAGCTTCACGGGCCCAGGGAGTCACAGTCCTGCCCATGAAGAA
GAGACCAGAGAAAGCAAGCATCCAAAGGGCACAGAAAGATGCCAACTAAT
GCCCCAGCTGCCGAGTCATAGCTTATGTCCCGCTTCAGCAAGCATCACTG
TGACACGCAGCTGAAAGTAGCTTGTGGTTATGCAACACCATGTCACCCTG
TTTTAAATACCTGTGTTATATGGATTGCTCTCTGACATTGTTACCGTGTA
CTTATTCTTTGTTTATTGATTTTATATTAATTAATTAATTAATTTTAATT
TGAAAAATCCTCCTTTCCTGCTGTCTGAAGCTGCAGGAAAGAGAGGTGTG
AATTGAAAGCCATGGTAACAACACCTGATATCAG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATTATTGTGGGCAATAATGTCCTC
ACTTTCACTCTGACTTGGTACCATGAAGCCTCCTTCAGTTTTACTCTGCC
TGCCTATCTGTTTATCACTTCTAGGGAGCACATTCTGGTTCCGCTGTCTT
CGTGGCGTCTCCCCTCTTGTCCGCCCCTCATTGCTTTAATTTGCATTGTT
TTCTCTCTTTTGTCTTTGGGTTTTGTTTGCTTTTCTTCTATTAGTTGTTA
AAAATTAGAAATGTAGGTAATTTGCGGTCTCTTTGTGCTTCCTTGCAGAA
ATCTACAGCTATGAAATGTTCTAACCACACCTCTGTGGTATCCGTGAGCT
TTGGTAGCTTTGCGCGCTTGCATTTGAACTTGTCTGAAAAGATTTCCTAA
TTTTTCTTATGAGTTTGCCAGCCATTTTATTTTGTTTGTGCTTTTGACCC
TCTTTTGTGATTTTTTTTTCAGTTTCGATTCTGATACGGATGTATAGCTT
TAATTCTCTGTGGCCACAGAAGATACTAGTCATGATCTTAGTCATTTAAC
TGCCAACGATTTGCTGTGCTGCCCAATCTGTGATCCATGCTGCAGCGGTC
CCTGCATGTTGAGAAGAGGTACTCTGCTGCTCTAGATAGCAGTGTGCAGG
TCCTAGATAGATGTTGCTCATTTTCATGTCGCTTGTGGTTTTG

Query= MSMg01no167_c06.b1 MSMg01no167_c06.b1 CHROMAT_FILE:
MSMg01no167_c06.b1 PHD_FILE: MSMg01no167_c06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:50 2005
         (689 letters)



>mm_chr11_34525388_34526476
          Length = 1089

 Score = 1096 bits (567), Expect = 0.0
 Identities = 652/691 (94%), Gaps = 26/691 (3%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcttgggatggcgtgtaaaccagcaatccttcctgagattgtaggctccagccatt 64
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gaattcttgggatggtgtgtaaaccagcaatccttcctgagattgtaggctccagccatt 256

                                                                       
Query: 65  ggctgcctgcccctaaccccagtcacttctactttgttcttacaaagttctaccatttgg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 257 ggctgcctgcccctaaccccagtcacttctactttgttcttacaaagttttaccatttgg 316

                                                                       
Query: 125 gggaaagctgaactatagcagtcaggtgcattatgggcctttcacctcccacccctctt- 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 317 gggaaagctgaactatagcagtcaggtgcattatgggcctttcacctcccacccctcttt 376

                                                                       
Query: 184 ccctg---ca-g---cttcctgggctaaagcacaggatgcctcatggtccatcc-tgctt 235
           |||||   || |   ||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 377 ccctgtaacatgtgacttcctgggctaaagcacaggatgcctcatggtccatccct-ctt 435

                                                                       
Query: 236 tcctactgtgagccaaggagggtaaattcttaggaagctgatggaggtgacctcagcaat 295
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tcctactgtgggccaaggagggtaaattcttaggaagctgatggaggtgacctcagcaat 495

                                                                       
Query: 296 cagccagacccatattccagcttcacgggcccagggagtcacagtcctgcccatgaagaa 355
           ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 496 cagccagacccatatgccagcttcacaggcccagggagtcacagtcctgcccatgaagaa 555

                                                                       
Query: 356 gagaccagagaaagcaagcatccaaagggcacagaaagatgccaactaatgccccagctg 415
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 556 gagaccagagaaagcaagcatccaaagggcacagaaagatgacaactaatgccccagctg 615

                                                                       
Query: 416 ccgagtcatagcttatgtcccgcttcagcaagcatcactgtgacacgcagctgaaagtag 475
           ||||||||||||||||||||||||||||||||||||||          ||||||||||||
Sbjct: 616 ccgagtcatagcttatgtcccgcttcagcaagcatcac----------agctgaaagtag 665

                                                                       
Query: 476 cttgtggttatgcaacaccatgtcaccctgttttaaatacctgtgttatatggattgctc 535
            |||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 attgtagtcatgcaacatcatgtcaccctgttttaaatacctgtgttatatggattgctc 725

                                                                       
Query: 536 tctgacattgttaccgtgtacttattctttgtttattgattttatattaattaattaatt 595
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 tctgacattgttaccatgtacttattctttgtttattgattttatattaattaattaatt 785

                                                                       
Query: 596 aattttaatttgaaaaa-tcctcctttcctgctgtctgaagctgcaggaaagagaggtgt 654
               ||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 786 ----ttaatttaaaaaaatcctcctttcctgctgtctgaagctgcaggaaagagaggtat 841

                                          
Query: 655 gaattgaaagccatggtaacaacacctgata 685
           ||||||||||||||||||||| |||||||||
Sbjct: 842 gaattgaaagccatggtaaca-cacctgata 871


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 689
Length of database: 1089
Length adjustment: 10
Effective length of query: 679
Effective length of database: 1079
Effective search space:   732641
Effective search space used:   732641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)