Query= MSMg01no167_c11.b1 MSMg01no167_c11.b1 CHROMAT_FILE:
MSMg01no167_c11.b1 PHD_FILE: MSMg01no167_c11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:51 2005
(613 letters)
>mm_chr11_59580771_59581784
Length = 1014
Score = 1110 bits (574), Expect = 0.0
Identities = 601/610 (98%), Gaps = 1/610 (0%)
Strand = Plus / Plus
Query: 5 gaattcagctgatcacccatagcaaatgttccagggaggaaaacagtcatttgcagtgga 64
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagctgaccaaacatagcaaatgttccagggaggaaaacagtcatttgcagtgga 264
Query: 65 catctactattttcttatccctcctccctgcataatacgttacagctaaggacttaggaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 catctactattttcttatccctcctccctgcataatacgttacagctaaggacttaggaa 324
Query: 125 ttgtgtggatggtactgggtattagacataatgtagagacagcctattgtatatgggagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttgtgtggatggtactgggtattagacataatgtagagacagcctattgtatatgggagg 384
Query: 185 attatgcagatattatatgccatttgtaatgggacttgaacatccacagaatttggtgcc 244
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 attatgcagatattgtatgccatttgtaatgggacttgaacatccacagaatttggtgcc 444
Query: 245 taatagaggtctcagaaccaatttctgacaggttataagtcctcacatagcctcacaacc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 taatagaggtctcagaaccaatttctgacaggttataagtcctcacatagcctcacaacc 504
Query: 305 tatatgaacagcttttatgtatccttaaatgtctaccttaaacatagcactgaacatgca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tatatgaacagcttttatgtatccttaaatgtctaccttaaacatagcactgaacatgca 564
Query: 365 caaggctcgcgggctccattcttaggcctctgtacgctactggt-aagaagtgacctcct 423
||||||| | |||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 565 caaggcttgggggctccattcttaggcctctgtacgctactggttaagaagtgaccttct 624
Query: 424 ctagtgtcttatgcaactgtgtgtagggatggtcactgttgtgttgtgctgttgtccccc 483
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 625 ctagtgtcttatgcaactgtgtgtggggatggtcactgttgtgttgtgctgttgtccccc 684
Query: 484 aggagctgaataaccgcctggctgcggagatcacacggttgcggacactactgactggag 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aggagctgaataaccgcctggctgcggagatcacacggttgcggacactactgactggag 744
Query: 544 acggtggtggggagtccactgggttgcctctcacacagggcaaggatgcctatgagttag 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 acggtggtggggagtccactgggttgcctctcacacagggcaaggatgcctatgagttag 804
Query: 604 aggtactgta 613
||||||||||
Sbjct: 805 aggtactgta 814
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1014
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1004
Effective search space: 605412
Effective search space used: 605412
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no167_c11.g1 MSMg01no167_c11.g1 CHROMAT_FILE:
MSMg01no167_c11.g1 PHD_FILE: MSMg01no167_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:51 2005
(672 letters)
>mm_chr11_59724507_59725578
Length = 1072
Score = 1224 bits (633), Expect = 0.0
Identities = 663/673 (98%), Gaps = 2/673 (0%)
Strand = Plus / Minus
Query: 1 aaggattaggacttaggagagtcaagggcctctcaggatacctgtagtccctaaagcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 aaggattaggacttaggagagtcaagggcctctcaggatacctgtagtccctaaagcctt 813
Query: 61 ccttcttacacccctagtccagccctcatctctcttgacctcttagacacagcctaggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 ccttcttacacccctagtccagccctcatctctcttgacctcttagacacagcctaggca 753
Query: 121 tgccagctgtctctaactggatgggccccagctgtcctcaccacttggtggagataggcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 tgccagctgtctctaactggatgggccccagctgtcctcaccacttggtggagataggcc 693
Query: 181 aaacatccacatccctccctctaggacagccagcacaagactgtgagacgataaggaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 692 aaacatccacatccctccctctaggacagccagcacaagactgtgagacaataaggaatg 633
Query: 241 ggaagggacctgttagttatagaaagtgactctcagccaatcgggttatttctctaatag 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 632 ggaagggacctgttagttatagaaagtgactctcagccaatcgggttatttctccaatag 573
Query: 301 tgacagccagccagtgactttggggcaaatgtaactgtctatccctgtaggcaacaaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 tgacagccagccagtgactttggggcaaatgtaactgtctatccctgtaggcaacaaaag 513
Query: 361 agccacagaggccttgtggagagacaaggctcctctgcctctgtagtggttctgtatggt 420
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 512 agccacagaggccttgtggagagacaagactcctctgcctctgtagtggttctgtatggt 453
Query: 421 ggtcaagaaaggtatactggaaaaagatgtggcagagtacaactgccccttagtcggagc 480
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 452 ggtcaagaaaggtatactggaaaaagatgtggcagagtacaactgacccttagtcagagc 393
Query: 481 ctcctatcacaatgatgagactggccagtaagaaacattcctaaggctagctgactgacc 540
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 392 ctcctatcacaatgatgagactggccagtaagaaacactcctaaggctagctgactgacc 333
Query: 541 ccttccccacccccagtgaattgtaccttgcacttctattttgagattgctcat-gaaat 599
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 332 ccttccccacccccagtgaattgtaccttgcacttctattttgagattgctc-tggaaat 274
Query: 600 cttaatcaagactcagttattaagggtcacacccacaattctgtgtgaccccagcagctt 659
|||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 273 cttaatcaagactcagttattaagggtcactcccacatttctgtgtgaccccagcagctt 214
Query: 660 agtggatctgact 672
|||||||||||||
Sbjct: 213 agtggatctgact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space: 703044
Effective search space used: 703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
