Query= MSMg01no168_e03.b1 MSMg01no168_e03.b1 CHROMAT_FILE:
MSMg01no168_e03.b1 PHD_FILE: MSMg01no168_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:37:20 2005
(416 letters)
>mm_chr11_22876077_22876892
Length = 816
Score = 700 bits (362), Expect = 0.0
Identities = 392/402 (97%), Gaps = 1/402 (0%)
Strand = Plus / Minus
Query: 15 ggaatt-ctagagaatacagtgggcattctcattaacaggcccctggctttgatgtgctg 73
|||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 738 ggaattcctagagaatacagtgggtattctcattaacaggcccctggttttgatgtgctg 679
Query: 74 tggaccaaacccaggatctagggcttgctaggtaaggttatgatgctgagctaaacccaa 133
|||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 678 tggagcaaacccaggatctagtgcttgctaggtaaggttatgatgctgagctaaacccaa 619
Query: 134 gcctgagcccaggtaccccttctcttattgccaactacctggctatttgttgtgcagggt 193
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 gcctgagcccaggtaccagttctcttattgccaactacctggctatttgttgtgcagggt 559
Query: 194 gtttcaggaacctgactttcacgttgttcccaaatgttatgtctgtttccctgacatttg 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gtttcaggaacctgactttcacgttgttcccaaatgttatgtctgtttccctgacatttg 499
Query: 254 tactgaatgctcttttctatgtacaacggagtcctccactttccttgtttgggacattag 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tactgaatgctcttttctatgtacaacggagtcctccactttccttgtttgggacattag 439
Query: 314 cactctattacctgttaatcacaaaagcgcaaacatttaatctgcttatgtctttatgaa 373
||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 438 tactctattacctgttaatcacaaaagcgcaaacatttaatctgcttatggctatatgaa 379
Query: 374 gcaacccattcattcacactagtacaccatggtgcacacgtg 415
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gcaacccattcattcacactagtacaccatggtgcacacgtg 337
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space: 328449
Effective search space used: 328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no168_e03.g1 MSMg01no168_e03.g1 CHROMAT_FILE:
MSMg01no168_e03.g1 PHD_FILE: MSMg01no168_e03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:37:21 2005
(294 letters)
>mm_chr11_22697822_22698515
Length = 694
Score = 549 bits (284), Expect = e-161
Identities = 290/292 (99%)
Strand = Plus / Plus
Query: 3 gttttagagaaaggtttataaatttataagtaggaaagggcatggctctcagccacatag 62
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gttttagagaaagatttataaatttataagtaggaaagggcatggctctcagccacatag 262
Query: 63 ctgacattcccctgcatgtcagatagggaaaggggacttcagagatagggtgggaagccc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ctgacattcccctgcatgtcagatagggaaaggggacttcagagatagggtgggaagccc 322
Query: 123 aaagtaccagaaaaggtacacttggactctggctggaacctgaaagaagagggcataaaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aaagtaccagaaaaggtacacttggactctggctggaacctgaaagaagagggcataaaa 382
Query: 183 gaagactcacaaaggcgggcaaacccacagagcctcagagaggcttctgaggactctcat 242
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gaagactcacaaaggtgggcaaacccacagagcctcagagaggcttctgaggactctcat 442
Query: 243 taaattcttaaattattcgtcctacctcttcagcataactcaaggtacacag 294
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 taaattcttaaattattcgtcctacctcttcagcataactcaaggtacacag 494
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
