Query= MSMg01no168_i07.b1 MSMg01no168_i07.b1 CHROMAT_FILE:
MSMg01no168_i07.b1 PHD_FILE: MSMg01no168_i07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:37:48 2005
(418 letters)
>mm_chr11_23047021_23047840
Length = 820
Score = 729 bits (377), Expect = 0.0
Identities = 396/403 (98%), Gaps = 2/403 (0%)
Strand = Plus / Plus
Query: 17 ggaattctgctggtcattgttttggcactgctggaactggggccaaacactctgattcca 76
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 217 ggaattctgctggtcattgttttggcactgctggaactggagccaaacactctgattcca 276
Query: 77 aaattcttcggaaatcaggttgcacaggagctttcaacgatagatgaagcccgttgtttt 136
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 277 aaattcttcggaaatcaggttgcacaggagctttcaacgatagatgaagcccgttggttt 336
Query: 137 taggccatttctaagtctgggtcacctggaaagagtaggataaagcctggctcttcacat 196
||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 337 tagcccatttctaagtctgggtctcctggaaagagtaggataaagcctggctcttcacat 396
Query: 197 actgtaagtccccgaggtctgtgagggtgactcctctcccaagcttccagctgtcgggat 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 actgtaagtccccgaggtctgtgagggtgactcctctcccaagcttccagctgtcgggat 456
Query: 257 tcagacactgaatgtctgattcatggtcttgtaaacacacctcctgaagtttgggtatta 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tcagacactgaatgtctgattcatggtcttgtaaacacacctcctgaagtttgggtatta 516
Query: 317 gctttgggtctgatatattgaagaccaggagaactactgttttttt--ctccattttcta 374
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 517 gctttgggtctgatatattgaagaccaggagaactactgtttttttttctccattttcta 576
Query: 375 ctaatgttttcattctgacctattactgaaaacttttagcaca 417
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 ttaatgttttcattctgacctattactgaaaacttttagcaca 619
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 820
Length adjustment: 9
Effective length of query: 409
Effective length of database: 811
Effective search space: 331699
Effective search space used: 331699
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no168_i07.g1 MSMg01no168_i07.g1 CHROMAT_FILE:
MSMg01no168_i07.g1 PHD_FILE: MSMg01no168_i07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:37:48 2005
(323 letters)
>mm_chr11_23158968_23159690
Length = 723
Score = 617 bits (319), Expect = 0.0
Identities = 322/323 (99%)
Strand = Plus / Minus
Query: 1 ttaactgctgagccattctgtaccatccttttcttaaaataacagtttgaaacctgtaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 ttaactgctgagccattctgtaccatccttttcttaaaataacagtttgaaacctgtaca 660
Query: 61 aagtgggccttggtggtctagtcctatatcccaccacctaggaggtgaaggcagaagtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 aagtgggccttggtggtctagtcctatatcccaccacctaggaggtgaaggcagaagtgt 600
Query: 121 gaattccaggataccttggactgcagagatcctgaataaaaaacacctcagcctttcagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 gaattccaggataccttggactgcagagatcctgaataaaaaacacctcagcctttcagt 540
Query: 181 gaaacctgtctcaaaacacagctaggacaagtagtttctccgctgtatttctgtagtagt 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 gaaacctggctcaaaacacagctaggacaagtagtttctccgctgtatttctgtagtagt 480
Query: 241 gctgctgatacttcaatacaaaggttttattaatcatgcccaagataaaacttagttata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gctgctgatacttcaatacaaaggttttattaatcatgcccaagataaaacttagttata 420
Query: 301 ataaatcaaagattaggtttggc 323
|||||||||||||||||||||||
Sbjct: 419 ataaatcaaagattaggtttggc 397
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
