Query= MSMg01no168_l02.b1 MSMg01no168_l02.b1 CHROMAT_FILE:
MSMg01no168_l02.b1 PHD_FILE: MSMg01no168_l02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:07 2005
(316 letters)
>mm_chr11_88916312_88917027
Length = 716
Score = 572 bits (296), Expect = e-168
Identities = 305/308 (99%), Gaps = 2/308 (0%)
Strand = Plus / Minus
Query: 5 gaattcagaaacctcatcatcccgccaagctacttaacttctattaaccagatgcgtaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gaattcagaaacctcatcatcccgccaagctacttaacttctattaaccagatgcgtaaa 385
Query: 65 gacaaaaacacaaattatgaaggggtaattcatttct-ttttttataaactttttcattt 123
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 384 gacaaaaacacaaattatgaaggggtaattcattt-tattttttataaactttttcattt 326
Query: 124 aaagttgacatataagatagttaattctgtgtatttgagaaaaattgggaattaagtaac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaagttgacatataagatagttaattctgtgtatttgagaaaaattgggaattaagtaac 266
Query: 184 taagaggttacgagagataaaatgttgttatggaaaatcataaaaccttacccaaggtcc 243
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 265 taagaggttacgagagataaaatgttgttatggtaaatcataaaaccttacccaaggtcc 206
Query: 244 agcatgatggcaaacatctttaacagcaccacttaggaggtaaaggcaacaggaccagaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 agcatgatggcaaacatctttaacagcaccacttaggaggtaaaggcaacaggaccagaa 146
Query: 304 gtttaagg 311
||||||||
Sbjct: 145 gtttaagg 138
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no168_l02.g1 MSMg01no168_l02.g1 CHROMAT_FILE:
MSMg01no168_l02.g1 PHD_FILE: MSMg01no168_l02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:07 2005
(283 letters)
>mm_chr11_88869876_88870558
Length = 683
Score = 514 bits (266), Expect = e-150
Identities = 278/282 (98%)
Strand = Plus / Plus
Query: 1 actctgtacaccatgctggccttgaactcagatatctgcctgcctctgcctccccaaggg 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actctgtataccatgctggccttgaactcagatatctgcctgcctctgcctccccaaggg 260
Query: 61 ttaggaaaggcatgcactgccaccagcctggcgcgtgtgaacttcctatgtgtatttctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaggaaaggcatgcactgccaccagcctggcgcgtgtgaacttcctatgtgtatttctc 320
Query: 121 tgggcaagtagttacagtaccctcctaggaactggggttgctgggtcttcgggtgtgttc 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 tgggcaagtagttacagtaccctcctaggaactggggttgctgggtcttggggtgtgttc 380
Query: 181 acctccaagcaggactttgccaagtggctgcccagggtggcagcatgaagtgtcatagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 acctccaagcaggactttgccaagtggctgcccagggtggcagcatgaagtgtcacagag 440
Query: 241 ttcctggtgctccatacacacacacacacacacacacacaca 282
|||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 ttcctggtgctccatacacacacacacacatacacacacaca 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
