Query= MSMg01no171_g20.b1 MSMg01no171_g20.b1 CHROMAT_FILE:
MSMg01no171_g20.b1 PHD_FILE: MSMg01no171_g20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:41:39 2005
(314 letters)
>mm_chr11_8703117_8703830
Length = 714
Score = 542 bits (280), Expect = e-158
Identities = 298/304 (98%)
Strand = Plus / Plus
Query: 10 ctctttagttcccggcagacgtttctctgggaattataaagatggttgataagatagacc 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 ctctttagttcccggcagacgtttctctgggaattataaagatggttgataagatagacc 269
Query: 70 tttaccactcttgggaaggatgattaaggaaagggtagtctatcttcctggatccatgta 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tttaccactcttgggaaggatgattaaggaaagggtagtctatcttcctggatccatgta 329
Query: 130 tgtaagagaggcaggcacagagatctgggcagacagaggtgccctggagtagcatcttag 189
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 330 tgtaagagaggcaggcacagagatgtgggcagacagaggtgccctggagtagcatcttag 389
Query: 190 ggacataatgagaccccaggaaccttgggtactgtgcagtggccaataaagcaagggttc 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ggacataatgagaccccaggaaccttgggtactgtgcagtggccaataaagcaagggttc 449
Query: 250 cctctctgtgatcagaccttggttgcctttttgtatatgtacttatcctagcactgctgc 309
||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||
Sbjct: 450 cctctctgtgatcagaccttggttgccacgtcgtatatgtacttatcgtagcactgctgc 509
Query: 310 acaa 313
||||
Sbjct: 510 acaa 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no171_g20.g1 MSMg01no171_g20.g1 CHROMAT_FILE:
MSMg01no171_g20.g1 PHD_FILE: MSMg01no171_g20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:41:39 2005
(276 letters)
>mm_chr11_8864628_8865304
Length = 677
Score = 482 bits (249), Expect = e-140
Identities = 270/277 (97%), Gaps = 1/277 (0%)
Strand = Plus / Minus
Query: 1 tatccatgatagcgaagctctttcctttgctgactccctcccaccccagagaggtaagac 60
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 477 tatccatgatagcgaagctctttcctttgctgactccctcccacagcagagaggtaagac 418
Query: 61 ctgtgcatggaagctgaacattcagatctgtgcggcacacgtagccaaactcctctttag 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 417 ctgtgcatggaagctgaacattcagatctgtgcggcacacgtagccagactcctctttag 358
Query: 121 ttgcccatgtttcagccaccctattcaatacactgccattgttcagttttacctcacata 180
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 357 ttgcccatatttcagccaccctattcaatacactgccattgctcagttttacctcacata 298
Query: 181 ggaagcagttactgtggaacattgtgggtctgtggagatgagatggaatcccacacagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ggaagcagttactgtggaacattgtgggtctgtggagatgagatggaatcccacacagac 238
Query: 241 ctgatcttagagaatttgtaattcagtaaaga-atct 276
|||| ||||||||||||||||||||||||||| ||||
Sbjct: 237 ctgaccttagagaatttgtaattcagtaaagatatct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 677
Length adjustment: 9
Effective length of query: 267
Effective length of database: 668
Effective search space: 178356
Effective search space used: 178356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
