Query= MSMg01no172_c21.b1 MSMg01no172_c21.b1 CHROMAT_FILE:
MSMg01no172_c21.b1 PHD_FILE: MSMg01no172_c21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:42:35 2005
(275 letters)
>mm_chr11_48917201_48917875
Length = 675
Score = 495 bits (256), Expect = e-144
Identities = 268/272 (98%)
Strand = Plus / Plus
Query: 4 ggaattccttgtttggcttttccatcattgcatagcctgttcctatctcaggctattaac 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccttgtttggcttttccatcattgcatagcctgttcctatctcaggctattaac 263
Query: 64 tctatatttgtaagaatgaaatttttattatgaaagaccttcatcagaaaccccaccccc 123
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tctatatttgtaagaatgaaaattttattatgaaagaccttcatcagaaaccccaccccc 323
Query: 124 atcaccacccagtgttataaaatgtaatgcggagatgggcaggggtacctggtgggttca 183
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 324 atcaccacccagtgttataaaatgtaatgtggagatgggcaggggtacctggtgggctca 383
Query: 184 tgccaagttgcccccctgagaaatcatgccacgagacagacctaatataagggaggtcta 243
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 384 tgccaagttgcccccctgagaaatcatgccacgagacagacctgatataagggaggtcta 443
Query: 244 tttggagaagagagggggagagaggacagact 275
||||||||||||||||||||||||||||||||
Sbjct: 444 tttggagaagagagggggagagaggacagact 475
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 275
Length of database: 675
Length adjustment: 9
Effective length of query: 266
Effective length of database: 666
Effective search space: 177156
Effective search space used: 177156
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no172_c21.g1 MSMg01no172_c21.g1 CHROMAT_FILE:
MSMg01no172_c21.g1 PHD_FILE: MSMg01no172_c21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:42:35 2005
(289 letters)
>mm_chr11_49069958_49070644
Length = 687
Score = 509 bits (263), Expect = e-148
Identities = 282/289 (97%), Gaps = 2/289 (0%)
Strand = Plus / Minus
Query: 1 caatggccaggatttcaggatttccccccccacttcctgctttctaaatagccgaccaag 60
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 487 caatggccaggatttcaggattt--ccccccacttcctgctttctaaataggtgaccaag 430
Query: 61 taggggaaagtctttaaaacaaaaggatgggagacaaacagcaaaaggaattaccttaaa 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 429 taggggaaagtctttaaaacaaaaggatgggagacaaacagcgaaaggaattaccttaaa 370
Query: 121 tgactgggataggacagtggccttgatttgtcacttcagttctatctgcaagttctcaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tgactgggataggacagtggccttgatttgtcacttcagttctatctgcaagttctcaga 310
Query: 181 atggctgcaaatcctcaagaaatccctacttacccttcaagtgattttactttcaaatga 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 atggcggcaaatcctcaagaaatccctacttacccttcaagtgattttactttcaaatga 250
Query: 241 cttgttttctctatatgttgaactaggtgcaatgcattcactagagtgc 289
||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 249 cttgttttctctagatgttgaactaggtgcaatgcattcactagagtgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 687
Length adjustment: 9
Effective length of query: 280
Effective length of database: 678
Effective search space: 189840
Effective search space used: 189840
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
