Query= MSMg01no173_b13.b1 MSMg01no173_b13.b1 CHROMAT_FILE:
MSMg01no173_b13.b1 PHD_FILE: MSMg01no173_b13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:42 2005
(314 letters)
>mm_chr11_97990780_97991494
Length = 715
Score = 565 bits (292), Expect = e-165
Identities = 307/312 (98%), Gaps = 3/312 (0%)
Strand = Plus / Plus
Query: 5 gaattc-atcacttgagctaacgtgcaggaatagtctgggattcctcatcctcttccttt 63
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaatcacttgagctaacgtgcaggaatagtctgggattcctcatcctcttccttt 264
Query: 64 caactatataccgttttatgtcactgtcccagacctggagggcactgctgtcctaaaaac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caactatataccgttttatgtcactgtcccagacctggagggcactgctgtcctaaaaac 324
Query: 124 ccatgaggtttcaaagtcagaagcatggattatgtccccatttctttgggattaccttga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccatgaggtttcaaagtcagaagcatggattatgtccccatttctttgggattaccttga 384
Query: 184 tttcttccaataattttgataatttttctgtgcataagcttttcatgtttatttcttttt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 385 tttcttccaataattttgataatttttctgtgcataagcttttcatgtttatttc-tttt 443
Query: 244 tttt-aaggttttacttatttattatatgtaagtacactatagctgtctttagatctcat 302
|||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tttttaaggttttatttatttattatatgtaagtacactatagctgtctttagatctcat 503
Query: 303 tacggatggttg 314
||| ||||||||
Sbjct: 504 taccgatggttg 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 715
Length adjustment: 9
Effective length of query: 305
Effective length of database: 706
Effective search space: 215330
Effective search space used: 215330
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no173_b13.g1 MSMg01no173_b13.g1 CHROMAT_FILE:
MSMg01no173_b13.g1 PHD_FILE: MSMg01no173_b13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:42 2005
(365 letters)
>mm_chr11_98154674_98155436
Length = 763
Score = 632 bits (327), Expect = 0.0
Identities = 355/365 (97%), Gaps = 2/365 (0%)
Strand = Plus / Minus
Query: 1 aataggaggtcttagctggctctgaccggctttcagcattatgctcccctggaaggttat 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 563 aataggaggtcttagctggctctgaccggctttcagcattatgctggtctggaaggttat 504
Query: 61 gactaagggcagctattccaaattgtgtaacaagtgagaaaggagaaggtagctgaagaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 503 gactaagggcagctattccaaattgtgtaacaagtgagaaaggagaaggtagctaaagaa 444
Query: 121 acaactcacctttctgctacctactaatctgtctgtctgtgtgagctggactggatgtgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 acaactcacctttctgctacctactaatctgtctgtctgtgtgagctggactggatgtgg 384
Query: 181 gcacaggactggacgaggtgacctccagatgtccctctggttctgtgatttgatagctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gcacaggactggacgaggtgacctccagatgtccctctggttctgtgatttgatagctct 324
Query: 241 agcctgaagtctaggcactgtgcctccatcctgggcagttgttgttggcagggggcctgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 323 agcctgaagtctaggcactgtgcctccatcctgggcagttgttgttggcaggggggctgc 264
Query: 301 agaagggaggggggggaggagtccagacttctgggtcaggattggtgaaggaggatgaga 360
||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||| |
Sbjct: 263 agaaggg--gggggggaggagtccagacttcagggtcaggattggtggaggaggatgata 206
Query: 361 ggtgg 365
|||||
Sbjct: 205 ggtgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 763
Length adjustment: 9
Effective length of query: 356
Effective length of database: 754
Effective search space: 268424
Effective search space used: 268424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
