Query= MSMg01no173_h13.b1 MSMg01no173_h13.b1 CHROMAT_FILE:
MSMg01no173_h13.b1 PHD_FILE: MSMg01no173_h13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:09 2005
(314 letters)
>mm_chr11_76257156_76257870
Length = 715
Score = 574 bits (297), Expect = e-168
Identities = 306/309 (99%), Gaps = 1/309 (0%)
Strand = Plus / Minus
Query: 4 ggaattccatcttggcatgcaggcttgatggctctcctctaggcccactctgaaggtagg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ggaattccatcttggcatgcaggcttgatggctctcctctaggcccactctgaaggtagg 453
Query: 64 agacacactgggaagccagtccagaaagcatcttgctacctgctgccattaggccctggg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 agacacactgggaagccagtccagaaagcatcttgctacctgctgccattaggccctggg 393
Query: 124 aacaccctcacaaacgctgaggagagtgctgtcctctcggctctggttcctgggccctga 183
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 392 aacaccctcacaaacgctgaggagagtgctgtcctctcagctctggttcctgggccctga 333
Query: 184 ggctcagaggctcagaggcagaaggcaggtttgatgccagcagctggccttggacgactc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ggctcagaggctcagaggcagaaggcaggtttgatgccagcagctggccttggacgactc 273
Query: 244 ccaccagcttgtcttctccaccctggaggaacatca-gagcccgcccttcaggtggggct 302
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 272 ccaccagcttgtcttctccaccctggaggaacatcaggcgcccgcccttcaggtggggct 213
Query: 303 tgcactttg 311
|||||||||
Sbjct: 212 tgcactttg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 715
Length adjustment: 9
Effective length of query: 305
Effective length of database: 706
Effective search space: 215330
Effective search space used: 215330
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no173_h13.g1 MSMg01no173_h13.g1 CHROMAT_FILE:
MSMg01no173_h13.g1 PHD_FILE: MSMg01no173_h13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:09 2005
(236 letters)
>mm_chr11_76136901_76137536
Length = 636
Score = 412 bits (213), Expect = e-120
Identities = 229/237 (96%), Gaps = 6/237 (2%)
Strand = Plus / Plus
Query: 5 ttttttaaacttaaaggaaaaacattcaagaaaatcatggagtagtctatgagcattcat 64
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 205 ttttttaaacttaaaggaaaaacattcaagaaaaccatggagtagtctatgagcattcat 264
Query: 65 accggaaaaacacaaccaaaaagccagaggacttcccaaataaactgacatttacataaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 accggaaaaacacaaccaaaaagccagaggacttcccaaataaactgacatttacataaa 324
Query: 125 tgctgacatccatttgaaattccagacgcaaggaaattaaaaccaaagacatggaaagcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgctgacatccatttgaaattccagacgcaaggaaattaaaaccaaagacatggaaagcc 384
Query: 185 agaagactg-----ttatttttctttctttctttctttctttctttctttctttctt 236
||||||||| || | ||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agaagactgggagctt-tctttctttctttctttctttctttctttctttctttctt 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
