Query= MSMg01no174_o21.b1 MSMg01no174_o21.b1 CHROMAT_FILE:
MSMg01no174_o21.b1 PHD_FILE: MSMg01no174_o21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:54 2005
(321 letters)
>mm_chr11_101882911_101883636
Length = 726
Score = 567 bits (293), Expect = e-166
Identities = 313/321 (97%), Gaps = 5/321 (1%)
Strand = Plus / Minus
Query: 5 gaattcagtacttgcctcagagaacctcagagctggcattctctggctcctgttgccccc 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 525 gaattcagtacttgcctcagagaacctcagagctggcattctctggctcctgttgcccac 466
Query: 65 agctgccctgtgatgggtgagccatgtctcccaacagatgaagatgtctctgttgcctct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 agctgccctgtgatgggtgagccatgtctcccaacagatgaagatgtctctgttgcctct 406
Query: 125 gcttctttacctgtgccatggagttggcgtacagcctgagat-cccccca--ccca--cc 179
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||
Sbjct: 405 gcttctttacctgtgccatggagttggcgtacagcctgagatcccccccacccccacccc 346
Query: 180 caccccgtgcactcacagtgttacgggttacattggtccagagaggagtatgtgatatac 239
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 cgccccgtgcactcacagtgttacgggttacattggtccagagaggagtatgtgatatac 286
Query: 240 agtgatgtagggactttggaggccagggggcaagtggcctcgggtgggcagtgggcagcc 299
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 285 agtgatgtagggactttggaggccagggggcaagtggcctcaggtgggcagtgggcagcc 226
Query: 300 tctgtagttagcggaatgtat 320
|||||||||||||||||||||
Sbjct: 225 tctgtagttagcggaatgtat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 726
Length adjustment: 9
Effective length of query: 312
Effective length of database: 717
Effective search space: 223704
Effective search space used: 223704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no174_o21.g1 MSMg01no174_o21.g1 CHROMAT_FILE:
MSMg01no174_o21.g1 PHD_FILE: MSMg01no174_o21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:54 2005
(660 letters)
>mm_chr11_101740256_101741319
Length = 1064
Score = 1114 bits (576), Expect = 0.0
Identities = 634/666 (95%), Gaps = 25/666 (3%)
Strand = Plus / Plus
Query: 1 tgataactctccatggggtggtcttcggtaccgctgtggctgggtaaaggcgggg----c 56
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 201 tgataactctccatggggtggtcttcggtaccgctgtggctgggtaaagggggggggggc 260
Query: 57 aggcaggggtgactgggaagggaggcgagaagacagcagcgcaagcacccaggccccacc 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggcaggggtgactgggaagggaggcgagaagacagcagcgcaagcacccaggccccacc 320
Query: 117 tgccgctcagaaaggtccaggttgactgcaatctcatatctccggagccgggtcaggtag 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgccgctcagaaaggtccaggttgactgcaatctcatatctccggagccgggtcaggtag 380
Query: 177 ttgtggtgggcgaactctgcctccagctcccgtagctgctccttggtgaaggctgtcctc 236
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgtggtgggcaaactctgcctccagctcccgtagctgctccttggtgaaggctgtcctc 440
Query: 237 tccttccgggctttgctgctgccttctggcttccctcctccgttctcctggttgtctgtg 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tccttccgggctttgctgctgccttctggcttccctcctccgttctcctggttgtctgtg 500
Query: 297 aaaagaagacccccacatgggggagacatagtgagctcatgacatgag-gggactcattc 355
|||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 501 aaaagaagacccccacatgggggagacatagtgagctcatgacatgagaggg-ctcattc 559
Query: 356 tcgtccatccattagtttgtaaacggttgggcagcatttcctcgtctgtctcgcttttaa 415
|| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 560 tcatccatccattagtttgtaaacagttgggcagcatttcctcgtctgtctcgcttttaa 619
Query: 416 attacactgagaagccctggcatccctcattccttccagcatcttgtccctaagatggtc 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 attacactgagaagccctggcatccctcattccttccagcatcttgtccctaagatggtc 679
Query: 476 aggaaacatttttagtcccagtctcaagtgtactctgctcacttccgttcccctcattag 535
|||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 680 -----------------ccagtctcaagtgtactctgctcacttccgttcccctcgttag 722
Query: 536 attttcacttcccgaggcaggcaaagcactgcttggctgtttaacgtctgtagccccagc 595
|||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 723 attttcacttcctgaggcaggcaaagcactgcttggctgtttaacgtctgtagtcccagc 782
Query: 596 ctgactctgggaaggcctcagtagcctgcagctcgaggg-tctccacacttcaagacaaa 654
|||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 783 ctgactctgggaaggcctcagtagcctgcagctc-aggggtctccacacttcaagacaaa 841
Query: 655 caaagt 660
||||||
Sbjct: 842 caaagt 847
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1064
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1054
Effective search space: 685100
Effective search space used: 685100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
