| Query= MSMg01no176_j19.g1 MSMg01no176_j19.g1 CHROMAT_FILE:
MSMg01no176_j19.g1 PHD_FILE: MSMg01no176_j19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:48:35 2005
(389 letters)
>mm_chr11_15938075_15938863
Length = 789
Score = 673 bits (348), Expect = 0.0
Identities = 379/396 (95%), Gaps = 12/396 (3%)
Strand = Plus / Plus
Query: 1 tttttaatcagtgaacaatgtgaggcaggatcaggtttatgttgctaataaaggcacaag 60
||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 201 tttttaatcagtgaacaatgtgaggcaggatcaggtttatggtgctaataaagggacaag 260
Query: 61 caaaagtaattaaatgatgtacttatcaagttctaatgatagggaaccaaaaccatgcaa 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 caaaagtaattaaatgatgtacttatcaagttctaatgatagggaaacaaaaccatgcaa 320
Query: 121 tgcaaattgaccactgcatgtaattaaaactaattttatcttattgctcaatgctgtcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcaaattgaccactgcatgtaattaaaactaattttatcttattgctcaatgctgtcac 380
Query: 181 tgtatttctctgattatatgtctacaacatctcaaaacagtaaatgtacattatgaagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtatttctctgattatatgtctacaacatctcaaaacagtaaatgtacattatgaagta 440
Query: 241 gaaaccatgcatgcaattttaattaacatatatatacatatat----------gtgtgtg 290
||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 gaaaccatgcatgcaattttaattaacatatatatacatatatatgtgtgtgtgtgtgtg 500
Query: 291 tatatatatatatatatatatatatatatacatatatatatatatatcttatttgcacac 350
| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 501 tgtatatatatatatatatatatatatata--tatatatatatatatcttatttgcacac 558
Query: 351 atttaatgaaatttttaaatgatcatgtttttcttt 386
|||||||||||||||||||||||||||||||||||
Sbjct: 559 gtttaatgaaatttttaaatgatcatgtttttcttt 594
Score = 76.1 bits (39), Expect = 4e-18
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 292 atatatatatatatatatatatatatatacatatatatatata 334
||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 545 atatatatatatatatatatatatatatatatatatatatata 503
Score = 74.2 bits (38), Expect = 1e-17
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 291 tatatatatatatatatatatatatatatacatatatatata 332
|||||||||||||||||||||||||||||| |||||||||||
Sbjct: 544 tatatatatatatatatatatatatatatatatatatatata 503
Score = 62.6 bits (32), Expect = 4e-14
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 291 tatatatatatatatatatatatatatataca 322
||||||||||||||||||||||||||||||||
Sbjct: 532 tatatatatatatatatatatatatatataca 501
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 85
Number of extensions: 20
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 5
Length of query: 389
Length of database: 789
Length adjustment: 9
Effective length of query: 380
Effective length of database: 780
Effective search space: 296400
Effective search space used: 296400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
